RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 DBNDD2Q9BQY9 259 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 COL18A1P39060 1754 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 BECN2A8MW95 431 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 EVCP57679 992 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 FGD1P98174 961 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 CCDC129Q6ZRS4 1044 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 DHX40Q8IX18 779 aaKnown RBP15.5■□□□□ 0.07
VRK3-209ENST00000594948 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 GOLPH3LQ9H4A5 285 aa15.5■□□□□ 0.07
VRK3-209ENST00000594948 MYH7P12883 1935 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 ERBB3P21860 1342 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
VRK3-209ENST00000594948 MYL6BP14649 208 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 CASP7P55210 303 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 CCZ1BP86790 482 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 CCZ1P86791 482 aaPredicted RBP15.49■□□□□ 0.07
VRK3-209ENST00000594948 ZMYM1Q5SVZ6 1142 aa15.49■□□□□ 0.07
VRK3-209ENST00000594948 DNAJC2Q99543 621 aaKnown RBP15.49■□□□□ 0.07
VRK3-209ENST00000594948 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
VRK3-209ENST00000594948 TUBB4AP04350 444 aa15.48■□□□□ 0.07
VRK3-209ENST00000594948 KCNJ6P48051 423 aa15.48■□□□□ 0.07
VRK3-209ENST00000594948 GABPB1Q06547 395 aaPredicted RBP15.48■□□□□ 0.07
VRK3-209ENST00000594948 PTPN14Q15678 1187 aa15.48■□□□□ 0.07
VRK3-209ENST00000594948 SEC62Q99442 399 aaKnown RBP15.48■□□□□ 0.07
VRK3-209ENST00000594948 RTEL1Q9NZ71 1219 aa15.48■□□□□ 0.07
VRK3-209ENST00000594948 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
VRK3-209ENST00000594948 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
VRK3-209ENST00000594948 CCDC69A6NI79 296 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 SKILP12757 684 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 PHKG2P15735 406 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 SLFNL1Q499Z3 407 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 ADALQ6DHV7 355 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 FMR1NBQ8N0W7 255 aaPredicted RBP15.47■□□□□ 0.07
VRK3-209ENST00000594948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.47■□□□□ 0.07
VRK3-209ENST00000594948 MRPS27Q92552 414 aaKnown RBP15.47■□□□□ 0.07
VRK3-209ENST00000594948 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 ADAMTSL3P82987 1691 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 APOBRQ0VD83 1088 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
VRK3-209ENST00000594948 FSIP1Q8NA03 581 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 RAPGEF4Q8WZA2 1011 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 PAG1Q9NWQ8 432 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 MORC2Q9Y6X9 1032 aaPredicted RBP15.47■□□□□ 0.07
VRK3-209ENST00000594948 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 C4AP0C0L4 1744 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
VRK3-209ENST00000594948 E7EWF7 191 aa15.46■□□□□ 0.07
VRK3-209ENST00000594948 YEATS4O95619 227 aa15.46■□□□□ 0.07
VRK3-209ENST00000594948 TATP17735 454 aaPredicted RBP15.46■□□□□ 0.07
VRK3-209ENST00000594948 SLC39A6Q13433 755 aa15.46■□□□□ 0.07
VRK3-209ENST00000594948 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
VRK3-209ENST00000594948 CCAR2Q8N163 923 aaKnown RBP15.46■□□□□ 0.07
VRK3-209ENST00000594948 ZNF397Q8NF99 534 aaPredicted RBP15.46■□□□□ 0.07
VRK3-209ENST00000594948 AXIN2Q9Y2T1 843 aa15.46■□□□□ 0.07
VRK3-209ENST00000594948 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 PDIA3P30101 505 aaKnown RBP15.45■□□□□ 0.06
VRK3-209ENST00000594948 IFNL2Q8IZJ0 200 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 CCDC150Q8NCX0 1101 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
VRK3-209ENST00000594948 FMNL2Q96PY5 1086 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 A0A087WZG4 1122 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 H7C1W4 665 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 IL15P40933 162 aaPredicted RBP15.45■□□□□ 0.06
VRK3-209ENST00000594948 ME1P48163 572 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
VRK3-209ENST00000594948 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 KCNG4Q8TDN1 519 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 LRRC2Q9BYS8 371 aa15.45■□□□□ 0.06
VRK3-209ENST00000594948 PSDA5PKW4 1024 aaPredicted RBP15.44■□□□□ 0.06
VRK3-209ENST00000594948 RNF113AO15541 343 aaKnown RBP15.44■□□□□ 0.06
VRK3-209ENST00000594948 HSPD1P10809 573 aaKnown RBP15.44■□□□□ 0.06
VRK3-209ENST00000594948 CEBPZQ03701 1054 aaKnown RBP15.44■□□□□ 0.06
VRK3-209ENST00000594948 LRRFIP1Q32MZ4 808 aaKnown RBP15.44■□□□□ 0.06
VRK3-209ENST00000594948 ATG9AQ7Z3C6 839 aa15.44■□□□□ 0.06
VRK3-209ENST00000594948 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
VRK3-209ENST00000594948 AOPEPQ8N6M6 819 aa15.44■□□□□ 0.06
VRK3-209ENST00000594948 POLR3EQ9NVU0 708 aa15.44■□□□□ 0.06
VRK3-209ENST00000594948 PCDHA7Q9UN72 937 aa15.44■□□□□ 0.06
VRK3-209ENST00000594948 FOXO4P98177 505 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 DCAF5Q96JK2 942 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 KIAA1468Q9P260 1216 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 MEGF6O75095 1541 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 MAST3O60307 1309 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 USP27XA6NNY8 438 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 CIAO1O76071 339 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 TPM4P67936 248 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 FAM193AP78312 1265 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 LMBR1LQ6UX01 489 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 LINC00301Q8NCQ3 95 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 FTOQ9C0B1 505 aaKnown RBP eCLIP15.43■□□□□ 0.06
VRK3-209ENST00000594948 FAM53CQ9NYF3 392 aa15.43■□□□□ 0.06
VRK3-209ENST00000594948 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms