RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 ERBB3P21860 1342 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 AKAP12Q02952 1782 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 PLEKHO1Q53GL0 409 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 ENGASEQ8NFI3 743 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 ZFP91Q96JP5 570 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 UTP14AQ9BVJ6 771 aaKnown RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 PFKFB2O60825 505 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 SERPINC1P01008 464 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 CCDC34Q96HJ3 373 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 CHMP4AQ9BY43 222 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
LINC01140-210ENST00000590653 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.38
LINC01140-210ENST00000590653 TIMM10P62072 90 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 CFAP100Q494V2 611 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 PDILTQ8N807 584 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 ZSWIM4Q9H7M6 989 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.38
LINC01140-210ENST00000590653 PNMA6AP0CW24 399 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-210ENST00000590653 HSP90AB3PQ58FF7 597 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 SPATA31D1Q6ZQQ2 1576 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 TNRQ92752 1358 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
LINC01140-210ENST00000590653 TPM4P67936 248 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-210ENST00000590653 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-210ENST00000590653 HOXB7P09629 217 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 NAA16Q6N069 864 aaPredicted RBP12.7□□□□□ -0.38
LINC01140-210ENST00000590653 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
LINC01140-210ENST00000590653 ZNF609O15014 1411 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
LINC01140-210ENST00000590653 GYS2P54840 703 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 SETD1AO15047 1707 aaKnown RBP12.69□□□□□ -0.38
LINC01140-210ENST00000590653 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
LINC01140-210ENST00000590653 TECPR2O15040 1411 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 ATP5JP18859 108 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 PDIA3P30101 505 aaKnown RBP12.69□□□□□ -0.38
LINC01140-210ENST00000590653 FANCCQ00597 558 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 TSGA10IPQ3SY00 556 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 TEX35Q5T0J7 233 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 USPL1Q5W0Q7 1092 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 DPF2Q92785 391 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
LINC01140-210ENST00000590653 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
LINC01140-210ENST00000590653 CPLX1O14810 134 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 ZNF202O95125 648 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 GCKRQ14397 625 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 E7EWF7 191 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 SPTLC2O15270 562 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 UBASH3AP57075 661 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 PSME1Q06323 249 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 IP6K1Q92551 441 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
LINC01140-210ENST00000590653 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
LINC01140-210ENST00000590653 ETF1P62495 437 aaKnown RBP12.68□□□□□ -0.38
LINC01140-210ENST00000590653 DDX21Q9NR30 783 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01140-210ENST00000590653 ARGLU1Q9NWB6 273 aaPredicted RBP12.68□□□□□ -0.38
LINC01140-210ENST00000590653 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 RXRAP19793 462 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 A0A087WZG4 1122 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 KCNA6P17658 529 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 PTPN12Q05209 780 aaKnown RBP12.67□□□□□ -0.38
LINC01140-210ENST00000590653 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 EVCP57679 992 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 ST5P78524 1137 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 LINC00301Q8NCQ3 95 aa12.67□□□□□ -0.38
LINC01140-210ENST00000590653 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
LINC01140-210ENST00000590653 GNG11P61952 73 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms