RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 TAF7LQ5H9L4 462 aa22.54■■□□□ 1.2
MBD3-207ENST00000590550 DDX41Q9UJV9 622 aaKnown RBP22.54■■□□□ 1.2
MBD3-207ENST00000590550 CCDC66A2RUB6 948 aa22.54■■□□□ 1.2
MBD3-207ENST00000590550 GUCY1B3Q02153 619 aa22.54■■□□□ 1.2
MBD3-207ENST00000590550 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
MBD3-207ENST00000590550 TTLL5Q6EMB2 1281 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 ARFGEF2Q9Y6D5 1785 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 MST1RQ04912 1400 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 H7C1W4 665 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 TERF2Q15554 542 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 TIGD1Q96MW7 591 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 CBX8Q9HC52 389 aa22.53■■□□□ 1.2
MBD3-207ENST00000590550 A0A087WWV3 80 aa22.52■■□□□ 1.2
MBD3-207ENST00000590550 CWC25Q9NXE8 425 aaPredicted RBP22.52■■□□□ 1.2
MBD3-207ENST00000590550 CTDNEP1O95476 244 aa22.51■■□□□ 1.19
MBD3-207ENST00000590550 PTGS1P23219 599 aa22.51■■□□□ 1.19
MBD3-207ENST00000590550 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
MBD3-207ENST00000590550 DNAJC25Q9H1X3 360 aa22.51■■□□□ 1.19
MBD3-207ENST00000590550 LMTK3Q96Q04 1460 aa22.51■■□□□ 1.19
MBD3-207ENST00000590550 GPHNQ9NQX3 736 aaPredicted RBP22.51■■□□□ 1.19
MBD3-207ENST00000590550 FKBP4Q02790 459 aaKnown RBP eCLIP22.5■■□□□ 1.192e-6■■□□□ 13.2
MBD3-207ENST00000590550 NSUN7Q8NE18 718 aaKnown RBP22.5■■□□□ 1.19
MBD3-207ENST00000590550 CLSTN2Q9H4D0 955 aa22.5■■□□□ 1.19
MBD3-207ENST00000590550 A0A1B0GUL7 405 aa22.5■■□□□ 1.19
MBD3-207ENST00000590550 PTPDC1A2A3K4 754 aa22.5■■□□□ 1.19
MBD3-207ENST00000590550 HSPD1P10809 573 aaKnown RBP22.5■■□□□ 1.19
MBD3-207ENST00000590550 DHX32Q7L7V1 743 aaKnown RBP22.5■■□□□ 1.19
MBD3-207ENST00000590550 NRBP1Q9UHY1 535 aa22.5■■□□□ 1.19
MBD3-207ENST00000590550 KIF1AQ12756 1690 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 IFIT1P09914 478 aaKnown RBP22.49■■□□□ 1.19
MBD3-207ENST00000590550 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 CERS3Q8IU89 383 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 COL18A1P39060 1754 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 MAST3O60307 1309 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 SH3TC1Q8TE82 1336 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 HAND2P61296 217 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 KIF18AQ8NI77 898 aa22.49■■□□□ 1.19
MBD3-207ENST00000590550 E7EWF7 191 aa22.48■■□□□ 1.19
MBD3-207ENST00000590550 M0R2C6 588 aa22.48■■□□□ 1.19
MBD3-207ENST00000590550 LRMPQ12912 555 aa22.48■■□□□ 1.19
MBD3-207ENST00000590550 RAB11FIP4Q86YS3 637 aa22.48■■□□□ 1.19
MBD3-207ENST00000590550 ZNF592Q92610 1267 aa22.48■■□□□ 1.19
MBD3-207ENST00000590550 DDX19AQ9NUU7 478 aaKnown RBP22.48■■□□□ 1.19
MBD3-207ENST00000590550 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.48■■□□□ 1.19
MBD3-207ENST00000590550 V9GYY5 206 aaPredicted RBP22.48■■□□□ 1.19
MBD3-207ENST00000590550 PFKFB2O60825 505 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 DRC7Q8IY82 874 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 ERCC4Q92889 916 aaPredicted RBP22.47■■□□□ 1.19
MBD3-207ENST00000590550 MORC2Q9Y6X9 1032 aaPredicted RBP22.47■■□□□ 1.19
MBD3-207ENST00000590550 EYA2O00167 538 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 ADORA1P30542 326 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 ZMYM1Q5SVZ6 1142 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 ST7Q9NRC1 585 aa22.47■■□□□ 1.19
MBD3-207ENST00000590550 IL15P40933 162 aaPredicted RBP22.46■■□□□ 1.19
MBD3-207ENST00000590550 SMARCC2Q8TAQ2 1214 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 TRIM5Q9C035 493 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 GOLGA6L6A8MZA4 724 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 TNNT1P13805 278 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 CAPN2P17655 700 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 ADD1P35611 737 aaKnown RBP22.46■■□□□ 1.19
MBD3-207ENST00000590550 ZNF165P49910 485 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 KRT222Q8N1A0 295 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 ZCRB1Q8TBF4 217 aaKnown RBP22.46■■□□□ 1.19
MBD3-207ENST00000590550 FBXW7Q969H0 707 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 TAOK2Q9UL54 1235 aa22.46■■□□□ 1.19
MBD3-207ENST00000590550 OTUD7BQ6GQQ9 843 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 PI16Q6UXB8 463 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 CCDC186Q7Z3E2 898 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 OSBP2Q969R2 916 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 TRIM34Q9BYJ4 488 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.19
MBD3-207ENST00000590550 GLI3P10071 1580 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 SMTNL1A8MU46 457 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 CCDC112Q8NEF3 446 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 USP28Q96RU2 1077 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 GOLPH3LQ9H4A5 285 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
MBD3-207ENST00000590550 EXOSC10Q01780 885 aaKnown RBP22.44■■□□□ 1.18
MBD3-207ENST00000590550 RFX7Q2KHR2 1363 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 PALLDQ8WX93 1383 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 TNS3Q68CZ2 1445 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 SPATA31A3Q5VYP0 1347 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 RNF113AO15541 343 aaKnown RBP22.44■■□□□ 1.18
MBD3-207ENST00000590550 SCARF1Q14162 830 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 DSCC1Q9BVC3 393 aa22.44■■□□□ 1.18
MBD3-207ENST00000590550 TPM3P06753 285 aa22.43■■□□□ 1.18
MBD3-207ENST00000590550 WASHC4Q2M389 1173 aa22.43■■□□□ 1.18
MBD3-207ENST00000590550 CCAR1Q8IX12 1150 aaKnown RBP22.43■■□□□ 1.18
MBD3-207ENST00000590550 SYNE4Q8N205 404 aa22.43■■□□□ 1.18
MBD3-207ENST00000590550 CFAP45Q9UL16 551 aa22.43■■□□□ 1.18
MBD3-207ENST00000590550 PDIA3P30101 505 aaKnown RBP22.43■■□□□ 1.18
MBD3-207ENST00000590550 RBM43Q6ZSC3 357 aaKnown RBP22.43■■□□□ 1.18
MBD3-207ENST00000590550 FAM89AQ96GI7 184 aa22.43■■□□□ 1.18
MBD3-207ENST00000590550 ZSCAN16Q9H4T2 348 aaPredicted RBP22.43■■□□□ 1.18
MBD3-207ENST00000590550 LAMA4Q16363 1823 aa22.42■■□□□ 1.18
MBD3-207ENST00000590550 GORABQ5T7V8 394 aa22.42■■□□□ 1.18
MBD3-207ENST00000590550 C11orf57Q6ZUT1 292 aaPredicted RBP22.42■■□□□ 1.18
MBD3-207ENST00000590550 STRN4Q9NRL3 753 aa22.42■■□□□ 1.18
MBD3-207ENST00000590550 HMGB1P09429 215 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms