RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 MYH15Q9Y2K3 1946 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 ZNF165P49910 485 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 HSP90AB3PQ58FF7 597 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 GPR108Q9NPR9 543 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 CCDC186Q7Z3E2 898 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 TRIM5Q9C035 493 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 GOLPH3LQ9H4A5 285 aa24.52■■□□□ 1.52
ZNF554-203ENST00000590116 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
ZNF554-203ENST00000590116 EYA2O00167 538 aa24.51■■□□□ 1.51
ZNF554-203ENST00000590116 EXOSC10Q01780 885 aaKnown RBP24.51■■□□□ 1.51
ZNF554-203ENST00000590116 STRCP1A6NGW2 1772 aa24.51■■□□□ 1.51
ZNF554-203ENST00000590116 FKBP4Q02790 459 aaKnown RBP eCLIP24.51■■□□□ 1.51
ZNF554-203ENST00000590116 NAA16Q6N069 864 aaPredicted RBP24.51■■□□□ 1.51
ZNF554-203ENST00000590116 USP28Q96RU2 1077 aa24.51■■□□□ 1.51
ZNF554-203ENST00000590116 ADORA1P30542 326 aa24.5■■□□□ 1.51
ZNF554-203ENST00000590116 ZNF75DP51815 510 aa24.5■■□□□ 1.51
ZNF554-203ENST00000590116 HAND2P61296 217 aa24.5■■□□□ 1.51
ZNF554-203ENST00000590116 RNF113AO15541 343 aaKnown RBP24.49■■□□□ 1.51
ZNF554-203ENST00000590116 C11orf57Q6ZUT1 292 aaPredicted RBP24.49■■□□□ 1.51
ZNF554-203ENST00000590116 CCAR1Q8IX12 1150 aaKnown RBP24.49■■□□□ 1.51
ZNF554-203ENST00000590116 TDRD7Q8NHU6 1098 aaKnown RBP24.49■■□□□ 1.51
ZNF554-203ENST00000590116 OSBP2Q969R2 916 aa24.49■■□□□ 1.51
ZNF554-203ENST00000590116 MTERF4Q7Z6M4 381 aaKnown RBP24.49■■□□□ 1.51
ZNF554-203ENST00000590116 ZNF710Q8N1W2 664 aa24.49■■□□□ 1.51
ZNF554-203ENST00000590116 AGXT2Q9BYV1 514 aa24.49■■□□□ 1.51
ZNF554-203ENST00000590116 PLA2G4DQ86XP0 818 aa24.48■■□□□ 1.51
ZNF554-203ENST00000590116 CCDC191Q8NCU4 936 aa24.48■■□□□ 1.51
ZNF554-203ENST00000590116 ERCC4Q92889 916 aaPredicted RBP24.48■■□□□ 1.51
ZNF554-203ENST00000590116 PARP4Q9UKK3 1724 aaKnown RBP24.48■■□□□ 1.51
ZNF554-203ENST00000590116 PDIA3P30101 505 aaKnown RBP24.47■■□□□ 1.51
ZNF554-203ENST00000590116 TOM1L2Q6ZVM7 507 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 RAB11FIP4Q86YS3 637 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 KIF3AQ9Y496 699 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 SPATA31A3Q5VYP0 1347 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 ILDR1Q86SU0 546 aaPredicted RBP24.47■■□□□ 1.51
ZNF554-203ENST00000590116 ZCRB1Q8TBF4 217 aaKnown RBP24.47■■□□□ 1.51
ZNF554-203ENST00000590116 PCDH11XQ9BZA7 1347 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 PCDH11YQ9BZA8 1340 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 KCPQ6ZWJ8 1503 aa24.47■■□□□ 1.51
ZNF554-203ENST00000590116 RCOR1Q9UKL0 485 aa24.46■■□□□ 1.51
ZNF554-203ENST00000590116 GTF2F1P35269 517 aaKnown RBP eCLIP24.46■■□□□ 1.51
ZNF554-203ENST00000590116 OTUD7BQ6GQQ9 843 aa24.46■■□□□ 1.51
ZNF554-203ENST00000590116 FBXW7Q969H0 707 aa24.46■■□□□ 1.51
ZNF554-203ENST00000590116 SALL1Q9NSC2 1324 aa24.46■■□□□ 1.51
ZNF554-203ENST00000590116 SCARF1Q14162 830 aa24.45■■□□□ 1.51
ZNF554-203ENST00000590116 CPDO75976 1380 aa24.45■■□□□ 1.51
ZNF554-203ENST00000590116 PI16Q6UXB8 463 aa24.45■■□□□ 1.5
ZNF554-203ENST00000590116 UBR2Q8IWV8 1755 aa24.45■■□□□ 1.5
ZNF554-203ENST00000590116 FOXP2O15409 715 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 CIAO1O76071 339 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 WASHC4Q2M389 1173 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 CCDC144BQ3MJ40 725 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 CCDC144CPQ8IYA2 1237 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 CARMIL3Q8ND23 1372 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 CEP126Q9P2H0 1117 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 NWD2Q9ULI1 1742 aa24.44■■□□□ 1.5
ZNF554-203ENST00000590116 RIOK3O14730 519 aaKnown RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 CHAF1AQ13111 956 aaPredicted RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 SNW1Q13573 536 aaKnown RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 CADPS2Q86UW7 1296 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 CLIP2Q9UDT6 1046 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 DCCP43146 1447 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 FDPSP14324 419 aaKnown RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ME1P48163 572 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 GORABQ5T7V8 394 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ZSCAN25Q6NSZ9 544 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 CCDC73Q6ZRK6 1079 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 TICAM2Q86XR7 235 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ZNF274Q96GC6 653 aaPredicted RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ZNF396Q96N95 335 aaPredicted RBP24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ZMYND15Q9H091 742 aa24.43■■□□□ 1.5
ZNF554-203ENST00000590116 ERVV-2B6SEH9 535 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 CAVIN2O95810 425 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 TTC39AQ5SRH9 613 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.42■■□□□ 1.5
ZNF554-203ENST00000590116 XAGE2Q96GT9 111 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 ATG3Q9NT62 314 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 IQCB1Q15051 598 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 CCDC57Q2TAC2 916 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 GJB4Q9NTQ9 266 aa24.42■■□□□ 1.5
ZNF554-203ENST00000590116 GOLGA6L19H0YKK7 550 aa24.41■■□□□ 1.5
ZNF554-203ENST00000590116 FSIP1Q8NA03 581 aa24.41■■□□□ 1.5
ZNF554-203ENST00000590116 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
ZNF554-203ENST00000590116 C16orf45Q96MC5 204 aaPredicted RBP24.41■■□□□ 1.5
ZNF554-203ENST00000590116 WDR17Q8IZU2 1322 aa24.41■■□□□ 1.5
ZNF554-203ENST00000590116 CCDC158Q5M9N0 1113 aa24.41■■□□□ 1.5
ZNF554-203ENST00000590116 CTAGE5O15320 804 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 KINO60870 393 aaKnown RBP24.4■■□□□ 1.5
ZNF554-203ENST00000590116 ARID5BQ14865 1188 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 STX1AQ16623 288 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 SYNE4Q8N205 404 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 CACTINQ8WUQ7 758 aaKnown RBP24.4■■□□□ 1.5
ZNF554-203ENST00000590116 BCL2L12Q9HB09 334 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 TAOK2Q9UL54 1235 aa24.4■■□□□ 1.5
ZNF554-203ENST00000590116 ZAP70P43403 619 aa24.39■■□□□ 1.5
ZNF554-203ENST00000590116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.39■■□□□ 1.5
ZNF554-203ENST00000590116 PUS7LQ9H0K6 701 aaKnown RBP24.39■■□□□ 1.5
ZNF554-203ENST00000590116 SPEF2Q9C093 1822 aa24.39■■□□□ 1.5
ZNF554-203ENST00000590116 FAM160A1Q05DH4 1040 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms