RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 NCAPD2Q15021 1401 aa7.58□□□□□ -1.2
LINC01539-202ENST00000589293 MAP2P11137 1827 aaKnown RBP7.57□□□□□ -1.2
LINC01539-202ENST00000589293 PXDNLA1KZ92 1463 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 PIK3CDO00329 1044 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 GYS1P13807 737 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 CRKLP46109 303 aaKnown RBP7.57□□□□□ -1.2
LINC01539-202ENST00000589293 C9orf131Q5VYM1 1079 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 NFATC2IPQ8NCF5 419 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 EHBP1Q8NDI1 1231 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 PCDHB9Q9Y5E1 797 aa7.57□□□□□ -1.2
LINC01539-202ENST00000589293 C10orf71Q711Q0 1435 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 NPHP1O15259 732 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 FOXC1Q12948 553 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 SULT6B1Q6IMI4 303 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 PHTF2Q8N3S3 785 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 FAM174AQ8TBP5 190 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 PANK3Q9H999 370 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 RNF181Q9P0P0 153 aa7.56□□□□□ -1.2
LINC01539-202ENST00000589293 CLSPNQ9HAW4 1339 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 TNFRSF10AO00220 468 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 GRM5P41594 1212 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 FSTL1Q12841 308 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 WWC1Q8IX03 1113 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 TTC5Q8N0Z6 440 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 CDK15Q96Q40 435 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 KDRP35968 1356 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
LINC01539-202ENST00000589293 GOLGB1Q14789 3259 aaKnown RBP7.54□□□□□ -1.2
LINC01539-202ENST00000589293 ESPNB1AK53 854 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 SOX11P35716 441 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 AKAP4Q5JQC9 854 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 SLC4A9Q96Q91 983 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 SRP68Q9UHB9 627 aaKnown RBP7.54□□□□□ -1.2
LINC01539-202ENST00000589293 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 C4AP0C0L4 1744 aa7.54□□□□□ -1.2
LINC01539-202ENST00000589293 N4BP2Q86UW6 1770 aaPredicted RBP7.54□□□□□ -1.2
LINC01539-202ENST00000589293 USP42Q9H9J4 1324 aaKnown RBP7.53□□□□□ -1.2
LINC01539-202ENST00000589293 STARD3NLO95772 234 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 NR3C2P08235 984 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
LINC01539-202ENST00000589293 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 DZIP3Q86Y13 1208 aaKnown RBP7.53□□□□□ -1.2
LINC01539-202ENST00000589293 AEBP1Q8IUX7 1158 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 MPNDQ8N594 471 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 SLC10A4Q96EP9 437 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 CALR3Q96L12 384 aaKnown RBP7.53□□□□□ -1.2
LINC01539-202ENST00000589293 RRAGCQ9HB90 399 aa7.53□□□□□ -1.2
LINC01539-202ENST00000589293 KDM6AO15550 1401 aaPredicted RBP7.52□□□□□ -1.2
LINC01539-202ENST00000589293 ZNF831Q5JPB2 1677 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 A0A087WZG4 1122 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 H0YIN7 160 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 J3QL48 77 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 RGS20O76081 388 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 LMNB1P20700 586 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 CHRNA5P30532 468 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 PRR20EP86478 221 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 PRR20CP86479 221 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 PRR20DP86480 221 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 PRR20BP86481 221 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 PRR20AP86496 221 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 SEMA3FQ13275 785 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 DNAJC10Q8IXB1 793 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
LINC01539-202ENST00000589293 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
LINC01539-202ENST00000589293 POLRMTO00411 1230 aaKnown RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 HMOX1P09601 288 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 VEGFAP15692 232 aaPredicted RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 CANXP27824 592 aaKnown RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 DDR1Q08345 913 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 TEFQ10587 303 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 INTS6LQ5JSJ4 861 aaKnown RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 C2CD5Q86YS7 1000 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 CCER1Q8TC90 406 aaPredicted RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 KCTD15Q96SI1 283 aaPredicted RBP7.51□□□□□ -1.21
LINC01539-202ENST00000589293 NARFQ9UHQ1 456 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 PDZRN3Q9UPQ7 1066 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 KCPQ6ZWJ8 1503 aa7.51□□□□□ -1.21
LINC01539-202ENST00000589293 COL5A3P25940 1745 aaPredicted RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 COL15A1P39059 1388 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 RNMTO43148 476 aaKnown RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 ADH1CP00326 375 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 SERPINB2P05120 415 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 SMPD1P17405 629 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 KCNA3P22001 575 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 FSHRP23945 695 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 TM4SF1P30408 202 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 PDE6BP35913 854 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 ARID5BQ14865 1188 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms