RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ZNF652Q9Y2D9 606 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 NPC1L1Q9UHC9 1359 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 A0A1B0GUL7 405 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 TULP1O00294 542 aaPredicted RBP2.3□□□□□ -2.04
ZNF260-203ENST00000588993 NRG2O14511 850 aaPredicted RBP2.3□□□□□ -2.04
ZNF260-203ENST00000588993 SGPL1O95470 568 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 SEC24BO95487 1268 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 PRPF40BQ6NWY9 871 aaKnown RBP2.3□□□□□ -2.04
ZNF260-203ENST00000588993 CLEC4GQ6UXB4 293 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 IFNL2Q8IZJ0 200 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 MTMR14Q8NCE2 650 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 LRCH3Q96II8 777 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 CRAMP1Q96RY5 1269 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 SRGNP10124 158 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ID4P47928 161 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 BCAMP50895 628 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 RAB30Q15771 203 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 XKR5Q6UX68 686 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ANKRD23Q86SG2 305 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ZNF622Q969S3 477 aaKnown RBP eCLIP2.3□□□□□ -2.04
ZNF260-203ENST00000588993 PRKAG3Q9UGI9 489 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ARHGAP33O14559 1287 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 ERC2O15083 957 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 PUM1Q14671 1186 aaKnown RBP eCLIP2.29□□□□□ -2.04
ZNF260-203ENST00000588993 ST3GAL2Q16842 350 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 LAPTM4BQ86VI4 370 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 HOOK2Q96ED9 719 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 NYXQ9GZU5 481 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 LMCD1Q9NZU5 365 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 RALGAPA2Q2PPJ7 1873 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 FAM205CA6NFA0 338 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 GRM1Q13255 1194 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 HOXA10P31260 410 aaPredicted RBP2.29□□□□□ -2.04
ZNF260-203ENST00000588993 MDM2Q00987 491 aaPredicted RBP2.29□□□□□ -2.04
ZNF260-203ENST00000588993 SERINC3Q13530 473 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 NBR1Q14596 966 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 SPRYD7Q5W111 196 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 KRT26Q7Z3Y9 468 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 HDGFL2Q7Z4V5 671 aaPredicted RBP2.29□□□□□ -2.04
ZNF260-203ENST00000588993 APOBEC3FQ8IUX4 373 aaKnown RBP2.29□□□□□ -2.04
ZNF260-203ENST00000588993 BCL2L13Q9BXK5 485 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 CACNA2D2Q9NY47 1150 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 MYO3BQ8WXR4 1341 aa2.29□□□□□ -2.04
ZNF260-203ENST00000588993 SMCPP49901 116 aaPredicted RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 ITPK1Q13572 414 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 NFIXQ14938 502 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 AMOTQ4VCS5 1084 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 PIGBQ92521 554 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 CDCA5Q96FF9 252 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 NBPF3Q9H094 633 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 C11orf49Q9H6J7 331 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 KTN1Q86UP2 1357 aaKnown RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 USP48Q86UV5 1035 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 LARGE2Q8N3Y3 721 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 CNBD1Q8NA66 436 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 AGBL3Q8NEM8 1001 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 MS4A4AQ96JQ5 239 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 GLIS2Q9BZE0 524 aaPredicted RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 MTIF3Q9H2K0 278 aaKnown RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 TBC1D8O95759 1140 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 CCL5P13501 91 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 MAGEA10P43363 369 aaPredicted RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 LDLRAD1Q5T700 205 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 TMEM132EQ6IEE7 984 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 RBM17Q96I25 401 aaKnown RBP2.28□□□□□ -2.04
ZNF260-203ENST00000588993 EYA3Q99504 573 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 ATG3Q9NT62 314 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 PRKAG2Q9UGJ0 569 aa2.28□□□□□ -2.04
ZNF260-203ENST00000588993 ZBTB7CA1YPR0 619 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 TRAF5O00463 557 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 GRK4P32298 578 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 IRS1P35568 1242 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 ZNF280AP59817 542 aaPredicted RBP2.28□□□□□ -2.05
ZNF260-203ENST00000588993 SRRDQ9UH36 339 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 PCDHB13Q9Y5F0 798 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 GJA3Q9Y6H8 435 aa2.28□□□□□ -2.05
ZNF260-203ENST00000588993 CENPJQ9HC77 1338 aaPredicted RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 GFRA3O60609 400 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 BMP1P13497 986 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 EPS15P42566 896 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 CRKLP46109 303 aaKnown RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 GTF2A2P52657 109 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 MPRIPQ6WCQ1 1025 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 TERF2IPQ9NYB0 399 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 STAP2Q9UGK3 403 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 CHIC2Q9UKJ5 165 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 SLC45A1Q9Y2W3 748 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 ROBO3Q96MS0 1386 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 FAM221BA6H8Z2 402 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 FCGRTP55899 365 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 GSE1Q14687 1217 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 ZNF513Q8N8E2 541 aaPredicted RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 CD99L2Q8TCZ2 262 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 U2AF1L4Q8WU68 220 aaKnown RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 POP1Q99575 1024 aaKnown RBP2.27□□□□□ -2.05
ZNF260-203ENST00000588993 HSPBP1Q9NZL4 362 aa2.27□□□□□ -2.05
ZNF260-203ENST00000588993 PTCH2Q9Y6C5 1203 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms