RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 ARHGEF12Q9NZN5 1544 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 ZEB2O60315 1214 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 SHOX2O60902 331 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 ZNF24P17028 368 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 PPP2R1AP30153 589 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 KCNJ6P48051 423 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CCT5P48643 541 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 MCM2P49736 904 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 ETF1P62495 437 aaKnown RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 TYRO3Q06418 890 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CEP85LQ5SZL2 805 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 ARHGAP22Q7Z5H3 698 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 TRIM7Q9C029 511 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CCDC141Q6ZP82 1450 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 OPA1O60313 960 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 SMTNP53814 917 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 ACTN3Q08043 901 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 BEND6Q5SZJ8 279 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 SFMBT2Q5VUG0 894 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 SARM1Q6SZW1 724 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CCDC146Q8IYE0 955 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 OSBPL9Q96SU4 736 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 FAM204AQ9H8W3 233 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CWC25Q9NXE8 425 aaPredicted RBP7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 CNPY2Q9Y2B0 182 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 PCDHGC5Q9Y5F6 944 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 MRFAP1Q9Y605 127 aa7.43□□□□□ -1.22
AP000547.3-204ENST00000588548 PLA2R1Q13018 1463 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 RASSF9O75901 435 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 SYT1P21579 422 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 MAGEA10P43363 369 aaPredicted RBP7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 DEUP1Q05D60 604 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 NEXNQ0ZGT2 675 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 AKNAD1Q5T1N1 836 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 CAPRIN2Q6IMN6 1127 aaKnown RBP7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 ZNF280DQ6N043 979 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 MIS18BP1Q6P0N0 1132 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 SLC30A9Q6PML9 568 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 ZCRB1Q8TBF4 217 aaKnown RBP7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 USP5P45974 858 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 GET4Q7L5D6 327 aaPredicted RBP7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 SLC39A2Q9NP94 309 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 SYNPO2Q9UMS6 1093 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 ARHGAP5Q13017 1502 aa7.42□□□□□ -1.22
AP000547.3-204ENST00000588548 PIK3C2GO75747 1445 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 LRRC10BA6NIK2 292 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 SMAPO00193 183 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 CAPN15O75808 1086 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 ROR2Q01974 943 aaKnown RBP7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 HSP90B2PQ58FF3 399 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 CCDC181Q5TID7 509 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 ZKSCAN2Q63HK3 967 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 BRAPQ7Z569 592 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 KIAA0825Q8IV33 1275 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 CCDC50Q8IVM0 306 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 NME8Q8N427 588 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 AFAP1L1Q8TED9 768 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 NUP133Q8WUM0 1156 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 HOOK2Q96ED9 719 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 CCDC114Q96M63 670 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 ALS2CR12Q96Q35 445 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 TMOD4Q9NZQ9 345 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 DDX19BQ9UMR2 479 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 L1RE1Q9UN81 338 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 PARP3Q9Y6F1 533 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 SYNRGQ9UMZ2 1314 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 ERICH2A1L162 156 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 PDLIM1O00151 329 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 TXLNAP40222 546 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 MAP3K11Q16584 847 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 ANO6Q4KMQ2 910 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 RBM41Q96IZ5 413 aaKnown RBP7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 RSRC1Q96IZ7 334 aaKnown RBP7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 PHACTR1Q9C0D0 580 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 COL17A1Q9UMD9 1497 aaPredicted RBP7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 RPGRIP1LQ68CZ1 1315 aa7.41□□□□□ -1.22
AP000547.3-204ENST00000588548 RIMBP3CA6NJZ7 1639 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 RIMBP3BA6NNM3 1639 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 RIMBP3Q9UFD9 1639 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 ATP6V1G1O75348 118 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 RNF8O76064 485 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 SASH1O94885 1247 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 GNAI3P08754 354 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 CDR1P51861 262 aa7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 G3BP1Q13283 466 aaKnown RBP eCLIP7.4□□□□□ -1.22
AP000547.3-204ENST00000588548 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms