RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 CT47B1P0C2W7 299 aaPredicted RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 KLRK1P26718 216 aa11.14□□□□□ -0.63
SDF2-207ENST00000588472 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.631e-9■■■■■ 61.1
SDF2-207ENST00000588472 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 TBC1D10BQ4KMP7 808 aaPredicted RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
SDF2-207ENST00000588472 FRAT1Q92837 279 aaPredicted RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 KAZALD1Q96I82 304 aa11.14□□□□□ -0.63
SDF2-207ENST00000588472 BICC1Q9H694 974 aaKnown RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 ABT1Q9ULW3 272 aaKnown RBP11.14□□□□□ -0.63
SDF2-207ENST00000588472 LEMD3Q9Y2U8 911 aa11.14□□□□□ -0.63
SDF2-207ENST00000588472 TRAF5O00463 557 aa11.13□□□□□ -0.63
SDF2-207ENST00000588472 HIRAP54198 1017 aaPredicted RBP11.13□□□□□ -0.63
SDF2-207ENST00000588472 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
SDF2-207ENST00000588472 TXNRD3Q86VQ6 643 aa11.13□□□□□ -0.63
SDF2-207ENST00000588472 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
SDF2-207ENST00000588472 MXD3Q9BW11 206 aa11.13□□□□□ -0.63
SDF2-207ENST00000588472 USP44Q9H0E7 712 aa11.13□□□□□ -0.63
SDF2-207ENST00000588472 WDR33Q9C0J8 1336 aaKnown RBP11.12□□□□□ -0.63
SDF2-207ENST00000588472 USP17L3A6NCW0 530 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 USP17L4A6NCW7 530 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 CCDC85CA6NKD9 419 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 BCAR3O75815 825 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 EGFRP00533 1210 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
SDF2-207ENST00000588472 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
SDF2-207ENST00000588472 USP17L1Q7RTZ2 530 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 DPF2Q92785 391 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
SDF2-207ENST00000588472 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
SDF2-207ENST00000588472 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
SDF2-207ENST00000588472 UTYO14607 1347 aa11.11□□□□□ -0.63
SDF2-207ENST00000588472 RPS12P25398 132 aaKnown RBP11.11□□□□□ -0.63
SDF2-207ENST00000588472 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
SDF2-207ENST00000588472 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
SDF2-207ENST00000588472 ANKRD44Q8N8A2 993 aa11.11□□□□□ -0.63
SDF2-207ENST00000588472 GLIS2Q9BZE0 524 aaPredicted RBP11.11□□□□□ -0.63
SDF2-207ENST00000588472 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
SDF2-207ENST00000588472 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
SDF2-207ENST00000588472 ECE1P42892 770 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 GTF2IP78347 998 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 GRM1Q13255 1194 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 COA1Q9GZY4 146 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 JAG2Q9Y219 1238 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
SDF2-207ENST00000588472 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
SDF2-207ENST00000588472 USP17L8P0C7I0 530 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 LRRC24Q50LG9 513 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 CD209Q9NNX6 404 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
SDF2-207ENST00000588472 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
SDF2-207ENST00000588472 CELF2O95319 508 aaKnown RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 GYG1P46976 350 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 SCARF1Q14162 830 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 RABL6Q3YEC7 729 aaPredicted RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 DACT2Q5SW24 774 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 CST9Q5W186 159 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 AGBL3Q8NEM8 1001 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 DCPSQ96C86 337 aaKnown RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 MEIS3Q99687 375 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 SIL1Q9H173 461 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 MYOZ2Q9NPC6 264 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 SCAF8Q9UPN6 1271 aaKnown RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 RIPOR2Q9Y4F9 1068 aa11.08□□□□□ -0.64
SDF2-207ENST00000588472 LRRFIP2Q9Y608 721 aaKnown RBP11.08□□□□□ -0.64
SDF2-207ENST00000588472 ADM5C9JUS6 153 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 F8W031 263 aaPredicted RBP11.07□□□□□ -0.64
SDF2-207ENST00000588472 RGS19P49795 217 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 KRT26Q7Z3Y9 468 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 KIAA0825Q8IV33 1275 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 OGFOD1Q8N543 542 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 GMLQ99445 158 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
SDF2-207ENST00000588472 TRIM27P14373 513 aa11.06□□□□□ -0.64
SDF2-207ENST00000588472 HIBADHP31937 336 aaKnown RBP11.06□□□□□ -0.64
SDF2-207ENST00000588472 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
SDF2-207ENST00000588472 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
SDF2-207ENST00000588472 ANGEL2Q5VTE6 544 aaKnown RBP11.06□□□□□ -0.64
SDF2-207ENST00000588472 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
SDF2-207ENST00000588472 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
SDF2-207ENST00000588472 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms