RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
RPRD1A-206ENST00000588459 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
RPRD1A-206ENST00000588459 CNNM1Q9NRU3 951 aa17.31■□□□□ 0.36
RPRD1A-206ENST00000588459 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
RPRD1A-206ENST00000588459 PLIN1O60240 522 aa17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 HNRNPUQ00839 825 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
RPRD1A-206ENST00000588459 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 KIF4BQ2VIQ3 1234 aa17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 AGBL3Q8NEM8 1001 aa17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 USP44Q9H0E7 712 aa17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 ZNF609O15014 1411 aa17.29■□□□□ 0.36
RPRD1A-206ENST00000588459 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
RPRD1A-206ENST00000588459 CST9Q5W186 159 aa17.28■□□□□ 0.36
RPRD1A-206ENST00000588459 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
RPRD1A-206ENST00000588459 PUS3Q9BZE2 481 aaKnown RBP17.28■□□□□ 0.36
RPRD1A-206ENST00000588459 ASTN2O75129 1339 aaPredicted RBP17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 IRS2Q9Y4H2 1338 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 VEGFBP49765 207 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 GMLQ99445 158 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
RPRD1A-206ENST00000588459 CELF2O95319 508 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 GGA3Q9NZ52 723 aa17.26■□□□□ 0.35
RPRD1A-206ENST00000588459 RASSF10A6NK89 507 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 GTF2IP78347 998 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 STRIP1Q5VSL9 837 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
RPRD1A-206ENST00000588459 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 LRRC24Q50LG9 513 aa17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 C15orf52Q6ZUT6 534 aaKnown RBP17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
RPRD1A-206ENST00000588459 BCAR3O75815 825 aa17.23■□□□□ 0.35
RPRD1A-206ENST00000588459 GRM1Q13255 1194 aa17.23■□□□□ 0.35
RPRD1A-206ENST00000588459 SCARF1Q14162 830 aa17.23■□□□□ 0.35
RPRD1A-206ENST00000588459 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
RPRD1A-206ENST00000588459 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
RPRD1A-206ENST00000588459 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 TLL2Q9Y6L7 1015 aa17.22■□□□□ 0.35
RPRD1A-206ENST00000588459 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 CYP4F22Q6NT55 531 aa17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-206ENST00000588459 IL1R1P14778 569 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 GYG1P46976 350 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 UBE4AQ14139 1066 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 NBPF9Q3BBW0 867 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 SAPCD2Q86UD0 394 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 CAPNS2Q96L46 248 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 MEIS3Q99687 375 aa17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
RPRD1A-206ENST00000588459 SASH1O94885 1247 aa17.19■□□□□ 0.34
RPRD1A-206ENST00000588459 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 F8W031 263 aaPredicted RBP17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 TRIM27P14373 513 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 VGLL2Q8N8G2 317 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 CDCA5Q96FF9 252 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 HDAC9Q9UKV0 1011 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
RPRD1A-206ENST00000588459 WNT10BO00744 389 aa17.17■□□□□ 0.34
RPRD1A-206ENST00000588459 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-206ENST00000588459 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-206ENST00000588459 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms