RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 HSPA1LP34931 641 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 ADD1P35611 737 aaKnown RBP21.76■■□□□ 1.07
DDX39A-206ENST00000587730 EVCP57679 992 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 IQCB1Q15051 598 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 LMBR1LQ6UX01 489 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 DDX46Q7L014 1031 aaKnown RBP21.76■■□□□ 1.07
DDX39A-206ENST00000587730 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
DDX39A-206ENST00000587730 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 SALL1Q9NSC2 1324 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 PARP4Q9UKK3 1724 aaKnown RBP21.76■■□□□ 1.07
DDX39A-206ENST00000587730 CABP4P57796 275 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 PDCL2Q8N4E4 241 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 CWC25Q9NXE8 425 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-206ENST00000587730 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 PKD1L3Q7Z443 1732 aa21.76■■□□□ 1.07
DDX39A-206ENST00000587730 A0A1W2PQ27 194 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 A0A1W2PQ64 194 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 A0A1W2PQD8 194 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 BECN2A8MW95 431 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 ZFYP08048 801 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-206ENST00000587730 CCDC129Q6ZRS4 1044 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 CEP57L1Q8IYX8 460 aa21.75■■□□□ 1.07
DDX39A-206ENST00000587730 RNF113AO15541 343 aaKnown RBP21.74■■□□□ 1.07
DDX39A-206ENST00000587730 FOXO4P98177 505 aa21.74■■□□□ 1.07
DDX39A-206ENST00000587730 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
DDX39A-206ENST00000587730 STOX1Q6ZVD7 989 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 ABCC12Q96J65 1359 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 SEC62Q99442 399 aaKnown RBP21.73■■□□□ 1.07
DDX39A-206ENST00000587730 E7EWF7 191 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 KIF2AO00139 706 aaPredicted RBP21.73■■□□□ 1.07
DDX39A-206ENST00000587730 GOLIM4O00461 696 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 DTNBO60941 627 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 CSB-PGBD3P0DP91 1061 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 GSDMDP57764 484 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 ZC3H6P61129 1189 aaKnown RBP21.73■■□□□ 1.07
DDX39A-206ENST00000587730 ATG9AQ7Z3C6 839 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 CCDC191Q8NCU4 936 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 FEZ1Q99689 392 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 KCND1Q9NSA2 647 aa21.73■■□□□ 1.07
DDX39A-206ENST00000587730 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
DDX39A-206ENST00000587730 EYA2O00167 538 aa21.72■■□□□ 1.07
DDX39A-206ENST00000587730 HSPD1P10809 573 aaKnown RBP21.72■■□□□ 1.07
DDX39A-206ENST00000587730 UTP14CQ5TAP6 766 aaKnown RBP21.72■■□□□ 1.07
DDX39A-206ENST00000587730 ENGASEQ8NFI3 743 aa21.72■■□□□ 1.07
DDX39A-206ENST00000587730 RTEL1Q9NZ71 1219 aa21.72■■□□□ 1.07
DDX39A-206ENST00000587730 RGPD5Q99666 1765 aa21.72■■□□□ 1.07
DDX39A-206ENST00000587730 CTDNEP1O95476 244 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 TNNT1P13805 278 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 KCNG4Q8TDN1 519 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 MRPS27Q92552 414 aaKnown RBP21.71■■□□□ 1.07
DDX39A-206ENST00000587730 NEUROD6Q96NK8 337 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 MYH15Q9Y2K3 1946 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 ATP5J2-PTCD1G3V325 749 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 PTCD1O75127 700 aaKnown RBP21.71■■□□□ 1.07
DDX39A-206ENST00000587730 IFIT1P09914 478 aaKnown RBP21.71■■□□□ 1.07
DDX39A-206ENST00000587730 PDIA3P30101 505 aaKnown RBP21.71■■□□□ 1.07
DDX39A-206ENST00000587730 ME1P48163 572 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 APOBRQ0VD83 1088 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 SNW1Q13573 536 aaKnown RBP21.71■■□□□ 1.07
DDX39A-206ENST00000587730 ADALQ6DHV7 355 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 BRAPQ7Z569 592 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 CCDC112Q8NEF3 446 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 BPIFA3Q9BQP9 254 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 IMPACTQ9P2X3 320 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 AKAP2Q9Y2D5 859 aa21.71■■□□□ 1.07
DDX39A-206ENST00000587730 SOCS7O14512 581 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 CYP27B1O15528 508 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 YEATS4O95619 227 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 ZRSR1Q15695 479 aaKnown RBP21.7■■□□□ 1.06
DDX39A-206ENST00000587730 TPD52L1Q16890 204 aaPredicted RBP21.7■■□□□ 1.06
DDX39A-206ENST00000587730 LRRC8AQ8IWT6 810 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 USP28Q96RU2 1077 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 COL18A1P39060 1754 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 CARMIL3Q8ND23 1372 aa21.7■■□□□ 1.06
DDX39A-206ENST00000587730 FSIP1Q8NA03 581 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 DDX17Q92841 729 aaKnown RBP21.69■■□□□ 1.06
DDX39A-206ENST00000587730 CPDO75976 1380 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 MAST3O60307 1309 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 TPM4P67936 248 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 PPP4R3BQ5MIZ7 849 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 BRINP3Q76B58 766 aa21.69■■□□□ 1.06
DDX39A-206ENST00000587730 CACTINQ8WUQ7 758 aaKnown RBP21.69■■□□□ 1.06
DDX39A-206ENST00000587730 TUBB4AP04350 444 aa21.68■■□□□ 1.06
DDX39A-206ENST00000587730 LRMPQ12912 555 aa21.68■■□□□ 1.06
DDX39A-206ENST00000587730 IMMTQ16891 758 aaKnown RBP21.68■■□□□ 1.06
DDX39A-206ENST00000587730 GTPBP4Q9BZE4 634 aaKnown RBP21.68■■□□□ 1.06
DDX39A-206ENST00000587730 POLR3EQ9NVU0 708 aa21.68■■□□□ 1.06
DDX39A-206ENST00000587730 CGNQ9P2M7 1197 aaKnown RBP21.68■■□□□ 1.06
DDX39A-206ENST00000587730 NRBP1Q9UHY1 535 aa21.68■■□□□ 1.06
DDX39A-206ENST00000587730 GLI3P10071 1580 aa21.67■■□□□ 1.06
DDX39A-206ENST00000587730 CCDC158Q5M9N0 1113 aa21.67■■□□□ 1.06
DDX39A-206ENST00000587730 C16orf45Q96MC5 204 aaPredicted RBP21.67■■□□□ 1.06
DDX39A-206ENST00000587730 LRRC2Q9BYS8 371 aa21.67■■□□□ 1.06
DDX39A-206ENST00000587730 CEP126Q9P2H0 1117 aa21.67■■□□□ 1.06
DDX39A-206ENST00000587730 ERVV-2B6SEH9 535 aa21.66■■□□□ 1.06
DDX39A-206ENST00000587730 NRDCO43847 1150 aa21.66■■□□□ 1.06
DDX39A-206ENST00000587730 C11orf57Q6ZUT1 292 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-206ENST00000587730 GOLPH3LQ9H4A5 285 aa21.66■■□□□ 1.06
DDX39A-206ENST00000587730 NDUFB9Q9Y6M9 179 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms