RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 VEGFBP49765 207 aa20.37■□□□□ 0.85
CXXC1-209ENST00000587342 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-209ENST00000587342 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
CXXC1-209ENST00000587342 PODNQ7Z5L7 613 aa20.37■□□□□ 0.85
CXXC1-209ENST00000587342 ZC3H15Q8WU90 426 aaKnown RBP20.37■□□□□ 0.85
CXXC1-209ENST00000587342 THSD7BQ9C0I4 1608 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 KIF4BQ2VIQ3 1234 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 DACT2Q5SW24 774 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 RBM26Q5T8P6 1007 aaKnown RBP20.36■□□□□ 0.85
CXXC1-209ENST00000587342 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
CXXC1-209ENST00000587342 BICC1Q9H694 974 aaKnown RBP20.36■□□□□ 0.85
CXXC1-209ENST00000587342 HSPA1AP0DMV8 641 aaKnown RBP20.35■□□□□ 0.85
CXXC1-209ENST00000587342 HSPA1BP0DMV9 641 aaKnown RBP20.35■□□□□ 0.85
CXXC1-209ENST00000587342 RABL6Q3YEC7 729 aaPredicted RBP20.35■□□□□ 0.85
CXXC1-209ENST00000587342 AGBL3Q8NEM8 1001 aa20.35■□□□□ 0.85
CXXC1-209ENST00000587342 COA1Q9GZY4 146 aa20.35■□□□□ 0.85
CXXC1-209ENST00000587342 USP44Q9H0E7 712 aa20.35■□□□□ 0.85
CXXC1-209ENST00000587342 CCDC57Q2TAC2 916 aa20.34■□□□□ 0.85
CXXC1-209ENST00000587342 PUS3Q9BZE2 481 aaKnown RBP20.34■□□□□ 0.85
CXXC1-209ENST00000587342 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
CXXC1-209ENST00000587342 ADM5C9JUS6 153 aa20.33■□□□□ 0.85
CXXC1-209ENST00000587342 CELF2O95319 508 aaKnown RBP20.33■□□□□ 0.85
CXXC1-209ENST00000587342 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
CXXC1-209ENST00000587342 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
CXXC1-209ENST00000587342 KCNJ4P48050 445 aa20.32■□□□□ 0.84
CXXC1-209ENST00000587342 RARSP54136 660 aaKnown RBP20.32■□□□□ 0.84
CXXC1-209ENST00000587342 LDHAL6AQ6ZMR3 332 aa20.32■□□□□ 0.84
CXXC1-209ENST00000587342 C15orf52Q6ZUT6 534 aaKnown RBP20.32■□□□□ 0.84
CXXC1-209ENST00000587342 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
CXXC1-209ENST00000587342 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
CXXC1-209ENST00000587342 NOB1Q9ULX3 412 aaKnown RBP20.32■□□□□ 0.84
CXXC1-209ENST00000587342 TLL2Q9Y6L7 1015 aa20.32■□□□□ 0.84
CXXC1-209ENST00000587342 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
CXXC1-209ENST00000587342 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
CXXC1-209ENST00000587342 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
CXXC1-209ENST00000587342 STRIP1Q5VSL9 837 aa20.31■□□□□ 0.84
CXXC1-209ENST00000587342 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
CXXC1-209ENST00000587342 CNNM1Q9NRU3 951 aa20.31■□□□□ 0.84
CXXC1-209ENST00000587342 POLR2AP24928 1970 aaKnown RBP20.31■□□□□ 0.84
CXXC1-209ENST00000587342 DEFB115Q30KQ5 88 aa20.3■□□□□ 0.84
CXXC1-209ENST00000587342 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
CXXC1-209ENST00000587342 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
CXXC1-209ENST00000587342 CD209Q9NNX6 404 aa20.3■□□□□ 0.84
CXXC1-209ENST00000587342 MYOZ2Q9NPC6 264 aa20.3■□□□□ 0.84
CXXC1-209ENST00000587342 PLIN1O60240 522 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 SCARF1Q14162 830 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 SAPCD2Q86UD0 394 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 CERS5Q8N5B7 392 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
CXXC1-209ENST00000587342 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
CXXC1-209ENST00000587342 GTF2IP78347 998 aa20.28■□□□□ 0.84
CXXC1-209ENST00000587342 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
CXXC1-209ENST00000587342 COL13A1Q5TAT6 717 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-209ENST00000587342 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
CXXC1-209ENST00000587342 CYP4F22Q6NT55 531 aa20.28■□□□□ 0.84
CXXC1-209ENST00000587342 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
CXXC1-209ENST00000587342 DCPSQ96C86 337 aaKnown RBP20.27■□□□□ 0.84
CXXC1-209ENST00000587342 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
CXXC1-209ENST00000587342 SCAF8Q9UPN6 1271 aaKnown RBP20.27■□□□□ 0.84
CXXC1-209ENST00000587342 IL1R1P14778 569 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 RFX5P48382 616 aaPredicted RBP20.26■□□□□ 0.83
CXXC1-209ENST00000587342 NBPF9Q3BBW0 867 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 VGLL2Q8N8G2 317 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 JAG2Q9Y219 1238 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 MYO3BQ8WXR4 1341 aa20.26■□□□□ 0.83
CXXC1-209ENST00000587342 FOXN1O15353 648 aa20.25■□□□□ 0.83
CXXC1-209ENST00000587342 HNRNPUQ00839 825 aaKnown RBP eCLIP20.25■□□□□ 0.83
CXXC1-209ENST00000587342 KIAA0825Q8IV33 1275 aa20.25■□□□□ 0.83
CXXC1-209ENST00000587342 SASH1O94885 1247 aa20.24■□□□□ 0.83
CXXC1-209ENST00000587342 GYG1P46976 350 aa20.24■□□□□ 0.83
CXXC1-209ENST00000587342 GRM1Q13255 1194 aa20.24■□□□□ 0.83
CXXC1-209ENST00000587342 PAXIP1Q6ZW49 1069 aaPredicted RBP20.24■□□□□ 0.83
CXXC1-209ENST00000587342 ZNF804AQ7Z570 1209 aa20.24■□□□□ 0.83
CXXC1-209ENST00000587342 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
CXXC1-209ENST00000587342 WNT10BO00744 389 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 AOC2O75106 756 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 BCAR3O75815 825 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 SULF1Q8IWU6 871 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 CDCA5Q96FF9 252 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 ZBED3Q96IU2 234 aaPredicted RBP20.23■□□□□ 0.83
CXXC1-209ENST00000587342 MEIS3Q99687 375 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 WBP1LQ9NX94 342 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 PCDHAC2Q9Y5I4 1007 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 MROH5Q6ZUA9 1318 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
CXXC1-209ENST00000587342 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
CXXC1-209ENST00000587342 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
CXXC1-209ENST00000587342 FAM84BQ96KN1 310 aaPredicted RBP20.22■□□□□ 0.83
CXXC1-209ENST00000587342 AOX1Q06278 1338 aa20.22■□□□□ 0.83
CXXC1-209ENST00000587342 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
CXXC1-209ENST00000587342 UBTFL1P0CB47 393 aaPredicted RBP20.21■□□□□ 0.83
CXXC1-209ENST00000587342 TRIM27P14373 513 aa20.21■□□□□ 0.83
CXXC1-209ENST00000587342 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
CXXC1-209ENST00000587342 GBA2Q9HCG7 927 aaPredicted RBP20.21■□□□□ 0.83
CXXC1-209ENST00000587342 LRRFIP2Q9Y608 721 aaKnown RBP20.21■□□□□ 0.83
CXXC1-209ENST00000587342 HUNKP57058 714 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms