RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
SDF2-204ENST00000587338 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
SDF2-204ENST00000587338 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
SDF2-204ENST00000587338 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
SDF2-204ENST00000587338 OTOP1Q7RTM1 612 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 HYPKQ9NX55 129 aa11.11□□□□□ -0.63
SDF2-204ENST00000587338 CHL1O00533 1208 aa11.1□□□□□ -0.63
SDF2-204ENST00000587338 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
SDF2-204ENST00000587338 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
SDF2-204ENST00000587338 JARID2Q92833 1246 aaPredicted RBP11.1□□□□□ -0.63
SDF2-204ENST00000587338 ANGEL1Q9UNK9 670 aaKnown RBP11.1□□□□□ -0.63
SDF2-204ENST00000587338 FZD1Q9UP38 647 aa11.1□□□□□ -0.63
SDF2-204ENST00000587338 A0A0C4DFX4 3053 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 MED23Q9ULK4 1368 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 MANSC4A6NHS7 340 aaPredicted RBP11.09□□□□□ -0.63
SDF2-204ENST00000587338 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
SDF2-204ENST00000587338 PDE8AO60658 829 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 HOXB7P09629 217 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
SDF2-204ENST00000587338 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 APOBEC3FQ8IUX4 373 aaKnown RBP11.09□□□□□ -0.63
SDF2-204ENST00000587338 MYD88Q99836 296 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
SDF2-204ENST00000587338 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
SDF2-204ENST00000587338 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
SDF2-204ENST00000587338 PCCAP05165 728 aaPredicted RBP11.08□□□□□ -0.64
SDF2-204ENST00000587338 EN2P19622 333 aaPredicted RBP11.08□□□□□ -0.64
SDF2-204ENST00000587338 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 CD99L2Q8TCZ2 262 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 ERO1AQ96HE7 468 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 PTPN22Q9Y2R2 807 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
SDF2-204ENST00000587338 INHBEP58166 350 aa11.07□□□□□ -0.64
SDF2-204ENST00000587338 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
SDF2-204ENST00000587338 DUSP27Q5VZP5 1158 aa11.07□□□□□ -0.64
SDF2-204ENST00000587338 KIAA0825Q8IV33 1275 aa11.07□□□□□ -0.64
SDF2-204ENST00000587338 CLMNQ96JQ2 1002 aa11.07□□□□□ -0.64
SDF2-204ENST00000587338 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
SDF2-204ENST00000587338 CWC25Q9NXE8 425 aaPredicted RBP11.07□□□□□ -0.64
SDF2-204ENST00000587338 RBBP6Q7Z6E9 1792 aaKnown RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 ZBTB48P10074 688 aaPredicted RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 CRHR2Q13324 411 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 CCDC191Q8NCU4 936 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 WNK4Q96J92 1243 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 COA1Q9GZY4 146 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 DEFB129Q9H1M3 183 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 MINPP1Q9UNW1 487 aa11.06□□□□□ -0.64
SDF2-204ENST00000587338 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 COL1A1P02452 1464 aaPredicted RBP11.06□□□□□ -0.64
SDF2-204ENST00000587338 SSC5DA1L4H1 1573 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
SDF2-204ENST00000587338 CTSWP56202 376 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 TTLL5Q6EMB2 1281 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 OTUD7BQ6GQQ9 843 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 BSDC1Q9NW68 430 aaPredicted RBP11.05□□□□□ -0.64
SDF2-204ENST00000587338 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
SDF2-204ENST00000587338 ZNF646O15015 1829 aaPredicted RBP11.05□□□□□ -0.64
SDF2-204ENST00000587338 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
SDF2-204ENST00000587338 MMP14P50281 582 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 GTF2IP78347 998 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 DLGAP5Q15398 846 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 GREM2Q9H772 168 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 MBIPQ9NS73 344 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
SDF2-204ENST00000587338 KLRK1P26718 216 aa11.03□□□□□ -0.64
SDF2-204ENST00000587338 SP3Q02447 781 aa11.03□□□□□ -0.64
SDF2-204ENST00000587338 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
SDF2-204ENST00000587338 ZBED3Q96IU2 234 aaPredicted RBP11.03□□□□□ -0.64
SDF2-204ENST00000587338 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
SDF2-204ENST00000587338 CLRN2A0PK11 232 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 H0YGN5 161 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
SDF2-204ENST00000587338 MYCP01106 439 aaPredicted RBP11.02□□□□□ -0.65
SDF2-204ENST00000587338 GJA5P36382 358 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
SDF2-204ENST00000587338 CAP1Q01518 475 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 SLC4A8Q2Y0W8 1093 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
SDF2-204ENST00000587338 VEZTQ9HBM0 779 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 LEMD3Q9Y2U8 911 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 PPP2R3BQ9Y5P8 575 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 ZNF804BA4D1E1 1349 aa11.02□□□□□ -0.65
SDF2-204ENST00000587338 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms