RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 PRDM1O75626 825 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 ZSCAN22P10073 491 aaPredicted RBP11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 PHKG2P15735 406 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
GPATCH8-205ENST00000587228 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 BAG6P46379 1132 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 TNNI2P48788 182 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 RAB3GAP1Q15042 981 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 DESP17661 470 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 SPA17Q15506 151 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 TAF4BQ92750 862 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ERLIN2O94905 339 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 FGFR1OPO95684 399 aaKnown RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ERVV-2B6SEH9 535 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 SYKP43405 635 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ZNF165P49910 485 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 EIF6P56537 245 aaKnown RBP11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 ZNF408Q9H9D4 720 aa11.17□□□□□ -0.62
GPATCH8-205ENST00000587228 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 MBD5Q9P267 1494 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 NEBLO76041 1014 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 AK2P54819 239 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 TRAF1Q13077 416 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 HSP90AA4PQ58FG1 418 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 TTLL7Q6ZT98 887 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 DHX32Q7L7V1 743 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 CENPHQ9H3R5 247 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 CALM1P0DP23 149 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 CALM2P0DP24 149 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 CALM3P0DP25 149 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 QTRT2Q9H974 415 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 ERMNQ8TAM6 284 aa11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 MPHOSPH6Q99547 160 aaKnown RBP11.16□□□□□ -0.62
GPATCH8-205ENST00000587228 B4E1Z4 1266 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 VPS36Q86VN1 386 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 MMRN2Q9H8L6 949 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 TSPOAP1O95153 1857 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 UBE2HP62256 183 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 CETN1Q12798 172 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 PRKG1Q13976 671 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 C6orf50Q9HD87 102 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 CLIP2Q9UDT6 1046 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 MACROD2A1Z1Q3 448 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 SP4Q02446 784 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 BICD1Q96G01 975 aa11.15□□□□□ -0.62
GPATCH8-205ENST00000587228 ESPNB1AK53 854 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 AATFQ9NY61 560 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 ZNF335Q9H4Z2 1342 aaPredicted RBP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 TNNT1P13805 278 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 STAT6P42226 847 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 KCNQ4P56696 695 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 LPIN2Q92539 896 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 STXBP4Q6ZWJ1 553 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
GPATCH8-205ENST00000587228 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 GPAA1O43292 621 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 TCP10Q12799 353 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 STX1AQ16623 288 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 C8orf34Q49A92 452 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 KANK3Q6NY19 840 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 RBM10P98175 930 aaKnown RBP11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 SEC24BO95487 1268 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 KCNG4Q8TDN1 519 aa11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
GPATCH8-205ENST00000587228 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms