RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 APPBP2Q92624 585 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 CCDC113Q9H0I3 377 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 LIN7BQ9HAP6 207 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 ST7Q9NRC1 585 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 PPT2Q9UMR5 302 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 SLC19A1P41440 591 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 LMNB2Q03252 620 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 PLEKHG6Q3KR16 790 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 TRPM4Q8TD43 1214 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 SALL4Q9UJQ4 1053 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 SUGT1Q9Y2Z0 365 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 MSRB2Q9Y3D2 182 aa8.96□□□□□ -0.98
TPM4-203ENST00000586193 A0A1W2PNR3 127 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 CTSOP43234 321 aaPredicted RBP8.95□□□□□ -0.98
TPM4-203ENST00000586193 GYS2P54840 703 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 AMPD3Q01432 767 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 FOXC1Q12948 553 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 SEZ6Q53EL9 994 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 TNNI3KQ59H18 835 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 MEIOBQ8N635 442 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 FAM169BQ8N8A8 192 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 DDX56Q9NY93 547 aaKnown RBP8.95□□□□□ -0.98
TPM4-203ENST00000586193 GJA3Q9Y6H8 435 aa8.95□□□□□ -0.98
TPM4-203ENST00000586193 SASH3O75995 380 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 MSX1P28360 303 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 IFRD2Q12894 506 aaPredicted RBP8.94□□□□□ -0.98
TPM4-203ENST00000586193 GRIN2CQ14957 1233 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 CCDC181Q5TID7 509 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 HOMER1Q86YM7 354 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 SLITRK4Q8IW52 837 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 SNIP1Q8TAD8 396 aaKnown RBP8.94□□□□□ -0.98
TPM4-203ENST00000586193 TCF12Q99081 682 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 CHPF2Q9P2E5 772 aa8.94□□□□□ -0.98
TPM4-203ENST00000586193 PHF20L1A8MW92 1017 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 J3QL48 77 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 TLR3O15455 904 aaKnown RBP8.93□□□□□ -0.98
TPM4-203ENST00000586193 TFE3P19532 575 aaPredicted RBP8.93□□□□□ -0.98
TPM4-203ENST00000586193 TTBK2Q6IQ55 1244 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 FAM196AQ6ZSG2 479 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 KRT25Q7Z3Z0 450 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 STAG1Q8WVM7 1258 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 IRF2BPLQ9H1B7 796 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 BRD7Q9NPI1 651 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 SLC52A1Q9NWF4 448 aa8.93□□□□□ -0.98
TPM4-203ENST00000586193 PDPK1O15530 556 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 SPINT1O43278 529 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 TRIM37O94972 964 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 EIF6P56537 245 aaKnown RBP8.92□□□□□ -0.98
TPM4-203ENST00000586193 DDR2Q16832 855 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 KIAA0907Q7Z7F0 614 aaPredicted RBP8.92□□□□□ -0.98
TPM4-203ENST00000586193 FBXO27Q8NI29 283 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 TSEN34Q9BSV6 310 aaKnown RBP8.92□□□□□ -0.98
TPM4-203ENST00000586193 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
TPM4-203ENST00000586193 CEP44Q9C0F1 390 aa8.92□□□□□ -0.98
TPM4-203ENST00000586193 G3BP2Q9UN86 482 aaKnown RBP8.92□□□□□ -0.98
TPM4-203ENST00000586193 MMP20O60882 483 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 TARSP26639 723 aaKnown RBP8.91□□□□□ -0.98
TPM4-203ENST00000586193 MCM4P33991 863 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 ARSHQ5FYA8 562 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 SPRYD7Q5W111 196 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 AGMOQ6ZNB7 445 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 CCNJLQ8IV13 435 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 TIMMDC1Q9NPL8 285 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 C11orf16Q9NQ32 467 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 ACTR10Q9NZ32 417 aa8.91□□□□□ -0.98
TPM4-203ENST00000586193 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 F13A1P00488 732 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 ACPPP15309 386 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 RHOQP17081 205 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 GIPRP48546 466 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 SQSTM1Q13501 440 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 SEPT6Q14141 434 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 ZNF697Q5TEC3 545 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 BNC2Q6ZN30 1099 aaPredicted RBP8.9□□□□□ -0.98
TPM4-203ENST00000586193 CNTNAP3BQ96NU0 1288 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 NECAB3Q96P71 396 aaPredicted RBP8.9□□□□□ -0.98
TPM4-203ENST00000586193 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 CRBNQ96SW2 442 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 OSMRQ99650 979 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 CNTNAP3Q9BZ76 1288 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 TMEM260Q9NX78 707 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 PKD2L1Q9P0L9 805 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 MAPK8IP1Q9UQF2 711 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.98
TPM4-203ENST00000586193 ROBO2Q9HCK4 1378 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 ENC1O14682 589 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 TRPA1O75762 1119 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 S100BP04271 92 aaPredicted RBP8.89□□□□□ -0.99
TPM4-203ENST00000586193 GRIA4P48058 902 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 SPRED3Q2MJR0 410 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 WDR44Q5JSH3 913 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 NCAPG2Q86XI2 1143 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 PLD4Q96BZ4 506 aa8.89□□□□□ -0.99
TPM4-203ENST00000586193 TMX1Q9H3N1 280 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms