RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
PPP4R1-225ENST00000583438 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
PPP4R1-225ENST00000583438 POM121Q96HA1 1249 aa10.72□□□□□ -0.69
PPP4R1-225ENST00000583438 ZNF496Q96IT1 587 aaPredicted RBP10.72□□□□□ -0.69
PPP4R1-225ENST00000583438 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
PPP4R1-225ENST00000583438 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 SCN4AP35499 1836 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 MMP16P51512 607 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 FSTL1Q12841 308 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 C2CD5Q86YS7 1000 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 SNED1Q8TER0 1413 aa10.71□□□□□ -0.69
PPP4R1-225ENST00000583438 LAMB2P55268 1798 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 CEMIPQ8WUJ3 1361 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 KCNC4Q03721 635 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 CC2D1BQ5T0F9 858 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 ZMYND15Q9H091 742 aa10.7□□□□□ -0.7
PPP4R1-225ENST00000583438 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 A1BGP04217 495 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 LMNB1P20700 586 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 OLFM4Q6UX06 510 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 PHACTR3Q96KR7 559 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 TBC1D2BQ9UPU7 963 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 KNSTRNQ9Y448 316 aa10.69□□□□□ -0.7
PPP4R1-225ENST00000583438 TAF1P21675 1872 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 C21orf2O43822 256 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 S1PR4O95977 384 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 PTPRNQ16849 979 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 TTLL6Q8N841 843 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
PPP4R1-225ENST00000583438 ZC3H4Q9UPT8 1303 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 HSPA1AP0DMV8 641 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 HSPA1BP0DMV9 641 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 NR6A1Q15406 480 aa10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
PPP4R1-225ENST00000583438 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 DIAPH1O60610 1272 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 C16orf71Q8IYS4 520 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
PPP4R1-225ENST00000583438 DDNO94850 711 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 MAP10Q9P2G4 905 aa10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 COL4A1P02462 1669 aa10.65□□□□□ -0.7
PPP4R1-225ENST00000583438 ZNF541Q9H0D2 1346 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 LTBP3Q9NS15 1303 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 TRPM7Q96QT4 1865 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 A6NJR5 290 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 SRGNP10124 158 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 ZNF622Q969S3 477 aaKnown RBP eCLIP10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 ANKRD36CQ5JPF3 1778 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 ABCC12Q96J65 1359 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 NPC1L1Q9UHC9 1359 aa10.64□□□□□ -0.71
PPP4R1-225ENST00000583438 H0YIN7 160 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 GPR37L1O60883 481 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 CCNYL3P0C7X3 344 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 DCTN1Q14203 1278 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 BRIP1Q9BX63 1249 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 EVA1BQ9NVM1 165 aa10.63□□□□□ -0.71
PPP4R1-225ENST00000583438 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 APBB1O00213 710 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 PPEF1O14829 653 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 U2SURPO15042 1029 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 RAD21O60216 631 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 IL6STP40189 918 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 ERFEQ4G0M1 354 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 MCM10Q7L590 875 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 MKRN1Q9UHC7 482 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 NDUFB9Q9Y6M9 179 aa10.62□□□□□ -0.71
PPP4R1-225ENST00000583438 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
PPP4R1-225ENST00000583438 CTHP32929 405 aa10.61□□□□□ -0.71
PPP4R1-225ENST00000583438 HLFQ16534 295 aa10.61□□□□□ -0.71
PPP4R1-225ENST00000583438 TNS4Q8IZW8 715 aa10.61□□□□□ -0.71
PPP4R1-225ENST00000583438 FOXN1O15353 648 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 STARD3NLO95772 234 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 KCNH2Q12809 1159 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 DZIP3Q86Y13 1208 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 TAOK3Q9H2K8 898 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms