RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 ME1P48163 572 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 CCAR1Q8IX12 1150 aaKnown RBP12.26□□□□□ -0.45
TOP3A-214ENST00000582981 ZCCHC17Q9NP64 241 aaKnown RBP12.26□□□□□ -0.45
TOP3A-214ENST00000582981 LCMT1Q9UIC8 334 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 A0A087WZG4 1122 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 SKILP12757 684 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 PDCP20941 246 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 GCKRQ14397 625 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 SCAND2PQ9GZW5 306 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-214ENST00000582981 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 A0A1B0GVL5 298 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 BECN2A8MW95 431 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
TOP3A-214ENST00000582981 DDX58O95786 925 aaKnown RBP12.25□□□□□ -0.45
TOP3A-214ENST00000582981 ST5P78524 1137 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 RESTQ13127 1097 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 TNNI3KQ59H18 835 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 FPGT-TNNI3KV9GXZ4 949 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 ZNF609O15014 1411 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 MYO1CO00159 1063 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 HSP90AA4PQ58FG1 418 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
TOP3A-214ENST00000582981 DDX21Q9NR30 783 aaKnown RBP eCLIP12.25□□□□□ -0.45
TOP3A-214ENST00000582981 CLCN6P51797 869 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
TOP3A-214ENST00000582981 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 AOPEPQ8N6M6 819 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 PNMA6AP0CW24 399 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-214ENST00000582981 RXRAP19793 462 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 MED23Q9ULK4 1368 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 ZSCAN26Q16670 478 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 FSIP1Q8NA03 581 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
TOP3A-214ENST00000582981 SMARCE1Q969G3 411 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 DDX19AQ9NUU7 478 aaKnown RBP12.23□□□□□ -0.45
TOP3A-214ENST00000582981 FHOD1Q9Y613 1164 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 CTDNEP1O95476 244 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 FKBP4Q02790 459 aaKnown RBP eCLIP12.23□□□□□ -0.45
TOP3A-214ENST00000582981 ANKRD13DQ6ZTN6 518 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 TXLNBQ8N3L3 684 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 KCNB2Q92953 911 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
TOP3A-214ENST00000582981 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
TOP3A-214ENST00000582981 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 PI16Q6UXB8 463 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 CCDC34Q96HJ3 373 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
TOP3A-214ENST00000582981 HOXB7P09629 217 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 TPM4P67936 248 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 GPS2Q13227 327 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 NSUN7Q8NE18 718 aaKnown RBP12.22□□□□□ -0.45
TOP3A-214ENST00000582981 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 PLA2G4DQ86XP0 818 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
TOP3A-214ENST00000582981 FAM53CQ9NYF3 392 aa12.22□□□□□ -0.45
TOP3A-214ENST00000582981 HIP1O00291 1037 aa12.21□□□□□ -0.45
TOP3A-214ENST00000582981 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-214ENST00000582981 CASQ1P31415 396 aa12.21□□□□□ -0.45
TOP3A-214ENST00000582981 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
TOP3A-214ENST00000582981 CCDC69A6NI79 296 aa12.21□□□□□ -0.46
TOP3A-214ENST00000582981 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-214ENST00000582981 NOP2P46087 812 aaKnown RBP12.21□□□□□ -0.46
TOP3A-214ENST00000582981 LMAN1P49257 510 aa12.21□□□□□ -0.46
TOP3A-214ENST00000582981 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.46
TOP3A-214ENST00000582981 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.46
TOP3A-214ENST00000582981 KINO60870 393 aaKnown RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 SMC2O95347 1197 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 AIFM3Q96NN9 605 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 ELP1O95163 1332 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-214ENST00000582981 IQCB1Q15051 598 aa12.2□□□□□ -0.46
TOP3A-214ENST00000582981 SF3A1Q15459 793 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms