RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CTSWP56202 376 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 HAND2P61296 217 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 OSBP2Q969R2 916 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 UQCRHLA0A096LP55 91 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 CSF1RP07333 972 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 UQCRHP07919 91 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 GTF3C6Q969F1 213 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 DDB1Q16531 1140 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
SRSF1-205ENST00000582730 ITGB4P16144 1822 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 KRT85P78386 507 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 LRRFIP1Q32MZ4 808 aaKnown RBP16.16■□□□□ 0.18
SRSF1-205ENST00000582730 CCDC183Q5T5S1 534 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 H3BQV1 296 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 APOBRQ0VD83 1088 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
SRSF1-205ENST00000582730 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
SRSF1-205ENST00000582730 ALDH8A1Q9H2A2 487 aaPredicted RBP16.16■□□□□ 0.18
SRSF1-205ENST00000582730 CCT2P78371 535 aaKnown RBP16.15■□□□□ 0.18
SRSF1-205ENST00000582730 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
SRSF1-205ENST00000582730 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
SRSF1-205ENST00000582730 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
SRSF1-205ENST00000582730 ZKSCAN5Q9Y2L8 839 aa16.15■□□□□ 0.18
SRSF1-205ENST00000582730 E7EWF7 191 aa16.15■□□□□ 0.18
SRSF1-205ENST00000582730 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.18
SRSF1-205ENST00000582730 ATP6V1AP38606 617 aa16.14■□□□□ 0.18
SRSF1-205ENST00000582730 CDHR2Q9BYE9 1310 aa16.14■□□□□ 0.17
SRSF1-205ENST00000582730 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
SRSF1-205ENST00000582730 SCRN1Q12765 414 aa16.14■□□□□ 0.17
SRSF1-205ENST00000582730 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
SRSF1-205ENST00000582730 ROBO1Q9Y6N7 1651 aa16.14■□□□□ 0.17
SRSF1-205ENST00000582730 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
SRSF1-205ENST00000582730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.14■□□□□ 0.17
SRSF1-205ENST00000582730 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.17
SRSF1-205ENST00000582730 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
SRSF1-205ENST00000582730 PDE8AO60658 829 aa16.13■□□□□ 0.17
SRSF1-205ENST00000582730 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-205ENST00000582730 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
SRSF1-205ENST00000582730 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
SRSF1-205ENST00000582730 GIMAP6Q6P9H5 292 aa16.13■□□□□ 0.17
SRSF1-205ENST00000582730 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
SRSF1-205ENST00000582730 RIC1Q4ADV7 1423 aa16.12■□□□□ 0.17
SRSF1-205ENST00000582730 PUS7LQ9H0K6 701 aaKnown RBP16.12■□□□□ 0.17
SRSF1-205ENST00000582730 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
SRSF1-205ENST00000582730 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
SRSF1-205ENST00000582730 MCAMP43121 646 aa16.12■□□□□ 0.17
SRSF1-205ENST00000582730 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
SRSF1-205ENST00000582730 IMMTQ16891 758 aaKnown RBP16.12■□□□□ 0.17
SRSF1-205ENST00000582730 ARID3AQ99856 593 aa16.12■□□□□ 0.17
SRSF1-205ENST00000582730 APPBP2Q92624 585 aa16.11■□□□□ 0.17
SRSF1-205ENST00000582730 SPATA32Q96LK8 384 aa16.11■□□□□ 0.17
SRSF1-205ENST00000582730 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.17
SRSF1-205ENST00000582730 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
SRSF1-205ENST00000582730 GPAA1O43292 621 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 APPP05067 770 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
SRSF1-205ENST00000582730 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
SRSF1-205ENST00000582730 CEBPZQ03701 1054 aaKnown RBP16.1■□□□□ 0.17
SRSF1-205ENST00000582730 SLC9C2Q5TAH2 1124 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 CCDC87Q9NVE4 849 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 ERVV-1B6SEH8 477 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 SNAP23O00161 211 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PDE8BO95263 885 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PHKA1P46020 1223 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
SRSF1-205ENST00000582730 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 LRP6O75581 1613 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 SPATA31A1Q5TZJ5 1347 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 DYNC1I1O14576 645 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 FGAP02671 866 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
SRSF1-205ENST00000582730 MCM5P33992 734 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 RAB11FIP4Q86YS3 637 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
SRSF1-205ENST00000582730 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 PFKFB2O60825 505 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 SIK1P57059 783 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.09■□□□□ 0.17
SRSF1-205ENST00000582730 CAMK4Q16566 473 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
SRSF1-205ENST00000582730 MARCH10Q8NA82 808 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-205ENST00000582730 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
SRSF1-205ENST00000582730 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-205ENST00000582730 LETM1O95202 739 aaPredicted RBP16.08■□□□□ 0.17
SRSF1-205ENST00000582730 EXOSC10Q01780 885 aaKnown RBP16.08■□□□□ 0.17
SRSF1-205ENST00000582730 CCDC102BQ68D86 513 aa16.08■□□□□ 0.17
SRSF1-205ENST00000582730 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.17
SRSF1-205ENST00000582730 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.17
SRSF1-205ENST00000582730 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.17
SRSF1-205ENST00000582730 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
SRSF1-205ENST00000582730 CDCA7Q9BWT1 371 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-205ENST00000582730 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms