RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
CDK5RAP3-225ENST00000582482 NLRP10Q86W26 655 aa12.69□□□□□ -0.38
CDK5RAP3-225ENST00000582482 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PAPPAQ13219 1627 aa12.69□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SLIT2O94813 1529 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 UBE2HP62256 183 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ITGB4P16144 1822 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 UBE2Q2LH0YL09 131 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 CCDC183Q5T5S1 534 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PHKA1P46020 1223 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PDLIM2Q96JY6 352 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 KCNQ2O43526 872 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 COL4A1P02462 1669 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 MAP3K15Q6ZN16 1313 aa12.67□□□□□ -0.38
CDK5RAP3-225ENST00000582482 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PTPDC1A2A3K4 754 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 NR1I2O75469 434 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
CDK5RAP3-225ENST00000582482 FGAP02671 866 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SPC24Q8NBT2 197 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 WWC3Q9ULE0 1092 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 H3BQV1 296 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 STARD3NLO95772 234 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 PCCAP05165 728 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 IFFO2Q5TF58 517 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
CDK5RAP3-225ENST00000582482 ABCC6O95255 1503 aa12.65□□□□□ -0.39
CDK5RAP3-225ENST00000582482 ADCY5O95622 1261 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 CTSWP56202 376 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 RESTQ13127 1097 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 LUZP1Q86V48 1076 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
CDK5RAP3-225ENST00000582482 EXOC5O00471 708 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 GPAA1O43292 621 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 CSF1RP07333 972 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 ANTXR2P58335 489 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 KRT85P78386 507 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 ITPK1Q13572 414 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 BCL9O00512 1426 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 TAF1P21675 1872 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 APPP05067 770 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 FDPSP14324 419 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 TBC1D10CQ8IV04 446 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 BICD2Q8TD16 824 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 GOLPH3LQ9H4A5 285 aa12.63□□□□□ -0.39
CDK5RAP3-225ENST00000582482 TACC3Q9Y6A5 838 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms