RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
SMCHD1-206ENST00000581631 MYRFLQ96LU7 910 aa7.95□□□□□ -1.14
SMCHD1-206ENST00000581631 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
SMCHD1-206ENST00000581631 ABI2Q9NYB9 513 aaPredicted RBP7.95□□□□□ -1.14
SMCHD1-206ENST00000581631 ATG7O95352 703 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 TMEM164Q5U3C3 297 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 TRIM42Q8IWZ5 723 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 UBASH3BQ8TF42 649 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 CLP1Q92989 425 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 SPACA7Q96KW9 195 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 SH2B1Q9NRF2 756 aaPredicted RBP7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 STIM2Q9P246 746 aa7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 FNDC3AQ9Y2H6 1198 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.94□□□□□ -1.14
SMCHD1-206ENST00000581631 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 NFKBIEO00221 500 aa7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 DDX3YO15523 660 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 GP2P55259 537 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 TTC39BQ5VTQ0 682 aaPredicted RBP7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 RNF43Q68DV7 783 aa7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 UTP4Q969X6 686 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 KLHDC7BQ96G42 594 aa7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 POP1Q99575 1024 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 TMEM63CQ9P1W3 806 aa7.93□□□□□ -1.14
SMCHD1-206ENST00000581631 SCNN1AP37088 669 aa7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 PDE12Q6L8Q7 609 aaKnown RBP7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 DTX1Q86Y01 620 aa7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 DBNDD2Q9BQY9 259 aa7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 SALL4Q9UJQ4 1053 aa7.92□□□□□ -1.14
SMCHD1-206ENST00000581631 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 HMX2A2RU54 273 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 DUOXA2Q1HG44 320 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 FAM20CQ8IXL6 584 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 ABTB2Q8N961 1025 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 WNT8BQ93098 351 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 SEC31BQ9NQW1 1179 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 CNTN3Q9P232 1028 aa7.91□□□□□ -1.14
SMCHD1-206ENST00000581631 H3BRJ5 948 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 ACPPP15309 386 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 PTPRAP18433 802 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 CDC25BP30305 580 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 IRAK1P51617 712 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 INTS5Q6P9B9 1019 aaKnown RBP7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 FAM83CQ9BQN1 747 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
SMCHD1-206ENST00000581631 PAX4O43316 350 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 PREPP48147 710 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 XKR5Q6UX68 686 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 CLEC10AQ8IUN9 316 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 NUDT16Q96DE0 195 aaKnown RBP7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 OSGEPQ9NPF4 335 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
SMCHD1-206ENST00000581631 TAL1P17542 331 aaPredicted RBP7.88□□□□□ -1.15
SMCHD1-206ENST00000581631 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
SMCHD1-206ENST00000581631 NCAPG2Q86XI2 1143 aa7.88□□□□□ -1.15
SMCHD1-206ENST00000581631 SOX13Q9UN79 622 aa7.88□□□□□ -1.15
SMCHD1-206ENST00000581631 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
SMCHD1-206ENST00000581631 ATCAYQ86WG3 371 aa7.87□□□□□ -1.15
SMCHD1-206ENST00000581631 CHRDQ9H2X0 955 aa7.87□□□□□ -1.15
SMCHD1-206ENST00000581631 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
SMCHD1-206ENST00000581631 SEPT3Q9UH03 358 aa7.87□□□□□ -1.15
SMCHD1-206ENST00000581631 GRIK1P39086 918 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 SHKBP1Q8TBC3 707 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 HHIPQ96QV1 700 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 RNF208Q9H0X6 261 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 HIF3AQ9Y2N7 669 aa7.86□□□□□ -1.15
SMCHD1-206ENST00000581631 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 BMP3P12645 472 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 TXKP42681 527 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 HGSNATQ68CP4 663 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 BEND4Q6ZU67 534 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 ZNF438Q7Z4V0 828 aa7.85□□□□□ -1.15
SMCHD1-206ENST00000581631 GGNBP2Q9H3C7 697 aa7.84□□□□□ -1.15
SMCHD1-206ENST00000581631 TRPA1O75762 1119 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 HOXA10P31260 410 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 NLRP12P59046 1061 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 TMEM102Q8N9M5 508 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 HELQQ8TDG4 1101 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 EDEM1Q92611 657 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 ADGRE2Q9UHX3 823 aa7.83□□□□□ -1.16
SMCHD1-206ENST00000581631 PDE2AO00408 941 aaPredicted RBP7.82□□□□□ -1.16
SMCHD1-206ENST00000581631 PDGFAP04085 211 aa7.82□□□□□ -1.16
SMCHD1-206ENST00000581631 ATP2B4P23634 1241 aa7.82□□□□□ -1.16
SMCHD1-206ENST00000581631 CABP4P57796 275 aa7.82□□□□□ -1.16
SMCHD1-206ENST00000581631 A6NHS1 94 aa7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 TIAF1O95411 115 aa7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 RPLP1P05386 114 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 CES1P23141 567 aa7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 TMPRSS13Q9BYE2 586 aa7.81□□□□□ -1.16
SMCHD1-206ENST00000581631 SOX1O00570 391 aaPredicted RBP7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 SART1O43290 800 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-206ENST00000581631 WNT11O96014 354 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms