RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 PBX4Q9BYU1 374 aa8.15□□□□□ -1.1
TTC39C-207ENST00000581394 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
TTC39C-207ENST00000581394 ABI2Q9NYB9 513 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-207ENST00000581394 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
TTC39C-207ENST00000581394 TAL1P17542 331 aaPredicted RBP8.14□□□□□ -1.11
TTC39C-207ENST00000581394 DUOXA2Q1HG44 320 aa8.14□□□□□ -1.11
TTC39C-207ENST00000581394 CEP120Q8N960 986 aa8.14□□□□□ -1.11
TTC39C-207ENST00000581394 FOXD4L4Q8WXT5 416 aaPredicted RBP8.14□□□□□ -1.11
TTC39C-207ENST00000581394 CARD10Q9BWT7 1032 aa8.14□□□□□ -1.11
TTC39C-207ENST00000581394 PRR19A6NJB7 356 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 ADAM11O75078 769 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 PTPRAP18433 802 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 EPHA1P21709 976 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 DTX1Q86Y01 620 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 GPR152Q8TDT2 470 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 WNT8BQ93098 351 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 FAM83CQ9BQN1 747 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 SEC31BQ9NQW1 1179 aa8.13□□□□□ -1.11
TTC39C-207ENST00000581394 KRTAP4-8A0A0G2JLE6 195 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 HMX2A2RU54 273 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 CDC25BP30305 580 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-207ENST00000581394 CLEC10AQ8IUN9 316 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 ABTB2Q8N961 1025 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 UBASH3BQ8TF42 649 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 STK32AQ8WU08 396 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-207ENST00000581394 STIM2Q9P246 746 aa8.12□□□□□ -1.11
TTC39C-207ENST00000581394 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
TTC39C-207ENST00000581394 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
TTC39C-207ENST00000581394 ADAMTS4O75173 837 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-207ENST00000581394 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
TTC39C-207ENST00000581394 ANKRD34AQ69YU3 496 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
TTC39C-207ENST00000581394 NCAPG2Q86XI2 1143 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 FAM20CQ8IXL6 584 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 KLHDC7BQ96G42 594 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 POP1Q99575 1024 aaKnown RBP8.11□□□□□ -1.11
TTC39C-207ENST00000581394 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
TTC39C-207ENST00000581394 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
TTC39C-207ENST00000581394 H3BRJ5 948 aa8.1□□□□□ -1.11
TTC39C-207ENST00000581394 PIP4K2BP78356 416 aa8.1□□□□□ -1.11
TTC39C-207ENST00000581394 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
TTC39C-207ENST00000581394 ZBTB39O15060 712 aa8.09□□□□□ -1.11
TTC39C-207ENST00000581394 YBX3P16989 372 aaKnown RBP eCLIP8.09□□□□□ -1.11
TTC39C-207ENST00000581394 SRPK2P78362 688 aaKnown RBP8.09□□□□□ -1.11
TTC39C-207ENST00000581394 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
TTC39C-207ENST00000581394 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
TTC39C-207ENST00000581394 BMP3P12645 472 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 CABP4P57796 275 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
TTC39C-207ENST00000581394 RNF208Q9H0X6 261 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 TMEM63CQ9P1W3 806 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
TTC39C-207ENST00000581394 ATG7O95352 703 aa8.07□□□□□ -1.12
TTC39C-207ENST00000581394 WNT11O96014 354 aa8.07□□□□□ -1.12
TTC39C-207ENST00000581394 PREPP48147 710 aa8.07□□□□□ -1.12
TTC39C-207ENST00000581394 ZMYND15Q9H091 742 aa8.07□□□□□ -1.12
TTC39C-207ENST00000581394 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
TTC39C-207ENST00000581394 NFKBIEO00221 500 aa8.06□□□□□ -1.12
TTC39C-207ENST00000581394 RPLP1P05386 114 aaKnown RBP8.06□□□□□ -1.12
TTC39C-207ENST00000581394 XKR5Q6UX68 686 aa8.06□□□□□ -1.12
TTC39C-207ENST00000581394 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
TTC39C-207ENST00000581394 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
TTC39C-207ENST00000581394 CNTN3Q9P232 1028 aa8.06□□□□□ -1.12
TTC39C-207ENST00000581394 KANSL3Q9P2N6 904 aa8.06□□□□□ -1.12
TTC39C-207ENST00000581394 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
TTC39C-207ENST00000581394 TMEM164Q5U3C3 297 aa8.05□□□□□ -1.12
TTC39C-207ENST00000581394 ZNF438Q7Z4V0 828 aa8.05□□□□□ -1.12
TTC39C-207ENST00000581394 RUSC1Q9BVN2 902 aa8.05□□□□□ -1.12
TTC39C-207ENST00000581394 FDX2Q6P4F2 183 aa8.04□□□□□ -1.12
TTC39C-207ENST00000581394 DZANK1Q9NVP4 752 aa8.04□□□□□ -1.12
TTC39C-207ENST00000581394 NLRP12P59046 1061 aa8.03□□□□□ -1.12
TTC39C-207ENST00000581394 ADGRE2Q9UHX3 823 aa8.03□□□□□ -1.12
TTC39C-207ENST00000581394 SOX13Q9UN79 622 aa8.03□□□□□ -1.12
TTC39C-207ENST00000581394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
TTC39C-207ENST00000581394 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
TTC39C-207ENST00000581394 WDR64B1ANS9 1081 aa8.02□□□□□ -1.13
TTC39C-207ENST00000581394 PDE2AO00408 941 aaPredicted RBP8.02□□□□□ -1.13
TTC39C-207ENST00000581394 ACPPP15309 386 aa8.02□□□□□ -1.13
TTC39C-207ENST00000581394 CES1P23141 567 aa8.02□□□□□ -1.13
TTC39C-207ENST00000581394 C1orf127Q8N9H9 656 aa8.02□□□□□ -1.13
TTC39C-207ENST00000581394 GAS2O43903 313 aaKnown RBP8.01□□□□□ -1.13
TTC39C-207ENST00000581394 MAP4P27816 1152 aaKnown RBP8.01□□□□□ -1.13
TTC39C-207ENST00000581394 ARL4DP49703 201 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 C19orf57Q0VDD7 668 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 ATCAYQ86WG3 371 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
TTC39C-207ENST00000581394 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 SLAIN2Q9P270 581 aa8.01□□□□□ -1.13
TTC39C-207ENST00000581394 HOXA10P31260 410 aaPredicted RBP8□□□□□ -1.13
TTC39C-207ENST00000581394 CPSF6Q16630 551 aaKnown RBP eCLIP8□□□□□ -1.13
TTC39C-207ENST00000581394 GIMAP7Q8NHV1 300 aa8□□□□□ -1.13
TTC39C-207ENST00000581394 PMEPA1Q969W9 287 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms