RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	NPHP1	O15259	732 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	VPS53	Q5VIR6	699 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	USPL1	Q5W0Q7	1092 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	VGLL2	Q8N8G2	317 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	ARHGEF1	Q92888	912 aa	Known RBP	11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	GBP4	Q96PP9	640 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	DSCC1	Q9BVC3	393 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	ANKRD2	Q9GZV1	360 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	SPON1	Q9HCB6	807 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	BSDC1	Q9NW68	430 aa	Predicted RBP	11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	SNX14	Q9Y5W7	946 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	CARMIL3	Q8ND23	1372 aa		11.88	□□□□□ -0.51
TRIM16-222	ENST00000581224	PNPLA7	Q6ZV29	1317 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	UBR3	Q6ZT12	1888 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	GOLGA6L22	H0YM25	854 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	ARID4A	P29374	1257 aa	Predicted RBP	11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	UBE4A	Q14139	1066 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	NFKBIB	Q15653	356 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	ZMYM1	Q5SVZ6	1142 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	SYNE4	Q8N205	404 aa		11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	RBM8A	Q9Y5S9	174 aa	Known RBP	11.87	□□□□□ -0.51
TRIM16-222	ENST00000581224	FAM177B	A6PVY3	158 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	ZBTB22	O15209	634 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	TAF5L	O75529	589 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	FGFR2	P21802	821 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	ERFE	Q4G0M1	354 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	TBC1D9B	Q66K14	1250 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	CREB3L3	Q68CJ9	461 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	SMIM5	Q71RC9	77 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	DDX46	Q7L014	1031 aa	Known RBP	11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	FAM227B	Q96M60	508 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	ZSWIM6	Q9HCJ5	1215 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	LIMCH1	Q9UPQ0	1083 aa		11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.86	□□□□□ -0.51
TRIM16-222	ENST00000581224		A0A0D9SFI3	127 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	DDX11L8	A8MPP1	907 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	SEMA3E	O15041	775 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	DDIT3	P35638	169 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	RPS8	P62241	208 aa	Known RBP	11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	MAP3K12	Q12852	859 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	CUL4A	Q13619	759 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	NBR1	Q14596	966 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	CAVIN4	Q5BKX8	364 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	MSL1	Q68DK7	614 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	RUFY3	Q7L099	469 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	COL23A1	Q86Y22	540 aa	Predicted RBP	11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	APPBP2	Q92624	585 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	MTFR1L	Q9H019	292 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	C4A	P0C0L4	1744 aa		11.85	□□□□□ -0.51
TRIM16-222	ENST00000581224	AKAP11	Q9UKA4	1901 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	SLC27A2	O14975	620 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	ST5	P78524	1137 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	PTH1R	Q03431	593 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	UBE3C	Q15386	1083 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	CCDC102B	Q68D86	513 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	PRPF40B	Q6NWY9	871 aa	Known RBP	11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	BLOC1S2	Q6QNY1	142 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	TMC4	Q7Z404	712 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	TMX3	Q96JJ7	454 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	JAKMIP1	Q96N16	626 aa	Known RBP	11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	BCL2L12	Q9HB09	334 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	PDRG1	Q9NUG6	133 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	PALD1	Q9ULE6	856 aa		11.84	□□□□□ -0.51
TRIM16-222	ENST00000581224	CAST	P20810	708 aa	Known RBP	11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	ADORA1	P30542	326 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	CHRND	Q07001	517 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	RAB3GAP1	Q15042	981 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	WASHC4	Q2M389	1173 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	BICDL1	Q6ZP65	573 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	AMIGO3	Q86WK7	504 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	KLHL34	Q8N239	644 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	CNBD1	Q8NA66	436 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	SPATA5	Q8NB90	893 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	SPRYD3	Q8NCJ5	442 aa		11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	PDS5A	Q29RF7	1337 aa	Known RBP	11.83	□□□□□ -0.52
TRIM16-222	ENST00000581224	CD2BP2	O95400	341 aa	Known RBP	11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	GNAT2	P19087	354 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	POLD1	P28340	1107 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	ZAP70	P43403	619 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	IMMT	Q16891	758 aa	Known RBP	11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	CLEC17A	Q6ZS10	378 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	VPS37D	Q86XT2	251 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	NLGN1	Q8N2Q7	840 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	TTC14	Q96N46	770 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	NEK1	Q96PY6	1258 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	SEC31B	Q9NQW1	1179 aa		11.82	□□□□□ -0.52
TRIM16-222	ENST00000581224	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	RASEF	Q8IZ41	740 aa		11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	SLC16A10	Q8TF71	515 aa		11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	EDC3	Q96F86	508 aa	Known RBP	11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	UPF3B	Q9BZI7	483 aa	Known RBP	11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	IL25	Q9H293	177 aa		11.81	□□□□□ -0.52
TRIM16-222	ENST00000581224	SRP68	Q9UHB9	627 aa	Known RBP	11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms