RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 KCNQ3O43525 872 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 TRIM27P14373 513 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 PIP4K2BP78356 416 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
PTPRM-213ENST00000580949 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-213ENST00000580949 RAPGEF4Q8WZA2 1011 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 GLMNQ92990 594 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 CCDC85AQ96PX6 553 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-213ENST00000580949 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 TSPYL4Q9UJ04 414 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 ABCC6O95255 1503 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 WDR17Q8IZU2 1322 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.13
PTPRM-213ENST00000580949 ROBO1Q9Y6N7 1651 aa7.96□□□□□ -1.13
PTPRM-213ENST00000580949 UBAP1LF5GYI3 381 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 TOM1O60784 492 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
PTPRM-213ENST00000580949 CANXP27824 592 aaKnown RBP7.96□□□□□ -1.14
PTPRM-213ENST00000580949 ATF7IPQ6VMQ6 1270 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 NFATC2IPQ8NCF5 419 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 BABAM1Q9NWV8 329 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 PCDHB11Q9Y5F2 797 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 MEGF6O75095 1541 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 RGPD5Q99666 1765 aa7.96□□□□□ -1.14
PTPRM-213ENST00000580949 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
PTPRM-213ENST00000580949 CYP27B1O15528 508 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 LILRA1O75019 489 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 PHKG2P15735 406 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 MAP7D1Q3KQU3 841 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 C1orf141Q5JVX7 400 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 TOM1L2Q6ZVM7 507 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 Q6ZVU0 165 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 DZIP1LQ8IYY4 767 aaKnown RBP7.95□□□□□ -1.14
PTPRM-213ENST00000580949 MEIOBQ8N635 442 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 STRN4Q9NRL3 753 aa7.95□□□□□ -1.14
PTPRM-213ENST00000580949 FAM208AQ9UK61 1670 aaKnown RBP7.95□□□□□ -1.14
PTPRM-213ENST00000580949 IPO8O15397 1037 aaKnown RBP7.94□□□□□ -1.14
PTPRM-213ENST00000580949 EVA1CP58658 441 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 EIF4A1P60842 406 aaKnown RBP7.94□□□□□ -1.14
PTPRM-213ENST00000580949 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 CC2D2BQ6DHV5 1058 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 TMEM57Q8N5G2 664 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 ARHGAP45Q92619 1136 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
PTPRM-213ENST00000580949 CYLDQ9NQC7 956 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 BTG4Q9NY30 223 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
PTPRM-213ENST00000580949 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 CBLBQ13191 982 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 MVPQ14764 893 aaKnown RBP7.93□□□□□ -1.14
PTPRM-213ENST00000580949 G2E3Q7L622 706 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 PLPP7Q8NBV4 271 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 ZCRB1Q8TBF4 217 aaKnown RBP7.93□□□□□ -1.14
PTPRM-213ENST00000580949 UCN2Q96RP3 112 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 ATP13A2Q9NQ11 1180 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 DACH1Q9UI36 760 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 KDM2BQ8NHM5 1336 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 KIF16BQ96L93 1317 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 OVOS2A0A0G2JMS6 1433 aa7.93□□□□□ -1.14
PTPRM-213ENST00000580949 KDM6AO15550 1401 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-213ENST00000580949 ABCA3Q99758 1704 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 BTBD11A6QL63 1104 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 ADAMTS2O95450 1211 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 IGHDP01880 384 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 ADH1AP07327 375 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 ADD1P35611 737 aaKnown RBP7.92□□□□□ -1.14
PTPRM-213ENST00000580949 TEFQ10587 303 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 TSGA10IPQ3SY00 556 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
PTPRM-213ENST00000580949 TRIM46Q7Z4K8 759 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 IFNL2Q8IZJ0 200 aa7.92□□□□□ -1.14
PTPRM-213ENST00000580949 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
PTPRM-213ENST00000580949 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-213ENST00000580949 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-213ENST00000580949 LZTS3O60299 673 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-213ENST00000580949 SKIP12755 728 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 IL2RBP14784 551 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 USP4Q13107 963 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 SCARF1Q14162 830 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 SKAP1Q86WV1 359 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 ITPRIPQ8IWB1 547 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 FTSJ3Q8IY81 847 aaKnown RBP7.91□□□□□ -1.14
PTPRM-213ENST00000580949 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 ZBTB40Q9NUA8 1239 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 ABCC4O15439 1325 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 PLEKHG2Q9H7P9 1386 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 RGS12O14924 1447 aa7.91□□□□□ -1.14
PTPRM-213ENST00000580949 COL22A1Q8NFW1 1626 aaPredicted RBP7.9□□□□□ -1.14
PTPRM-213ENST00000580949 SOS1Q07889 1333 aaPredicted RBP7.9□□□□□ -1.14
PTPRM-213ENST00000580949 PRAMEF22A3QJZ6 481 aa7.9□□□□□ -1.14
PTPRM-213ENST00000580949 ZBTB7BO15156 539 aaPredicted RBP7.9□□□□□ -1.14
PTPRM-213ENST00000580949 UPP2O95045 317 aa7.9□□□□□ -1.14
PTPRM-213ENST00000580949 MYCP01106 439 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms