RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 RNF113AO15541 343 aaKnown RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 LARGE1O95461 756 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 IGHMBP2P38935 993 aaKnown RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 CTCFLQ8NI51 663 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 SPECC1Q5M775 1068 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 EAF2Q96CJ1 260 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 JADE2Q9NQC1 790 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 IQSEC3Q9UPP2 1182 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 IL15P40933 162 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 TXLNBQ8N3L3 684 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 RSPH14Q9UHP6 348 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 POGZQ7Z3K3 1410 aa15.59■□□□□ 0.09
TRAPPC8-207ENST00000580104 TNNI3KQ59H18 835 aa15.58■□□□□ 0.09
TRAPPC8-207ENST00000580104 CTR9Q6PD62 1173 aa15.58■□□□□ 0.09
TRAPPC8-207ENST00000580104 TMOD3Q9NYL9 352 aa15.58■□□□□ 0.09
TRAPPC8-207ENST00000580104 FPGT-TNNI3KV9GXZ4 949 aa15.58■□□□□ 0.09
TRAPPC8-207ENST00000580104 KRT28Q7Z3Y7 464 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 TM6SF1Q9BZW5 370 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZSWIM6Q9HCJ5 1215 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 PLXNC1O60486 1568 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 CAPN2P17655 700 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 MYL5Q02045 173 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 IQCA1Q86XH1 822 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 TNRQ92752 1358 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 RNMTO43148 476 aaKnown RBP15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 CCDC175P0C221 793 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 FANCCQ00597 558 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 SRRTQ9BXP5 876 aaKnown RBP15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 LUC7LQ9NQ29 371 aaKnown RBP15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 VPS18Q9P253 973 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 MRVI1Q9Y6F6 885 aa15.58■□□□□ 0.08
TRAPPC8-207ENST00000580104 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 CTAGE15A4D2H0 777 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 CTAGE8P0CG41 777 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 CTAGE6Q86UF2 777 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 CTAGE4Q8IX94 777 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 GOLGA1Q92805 767 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 XPO4Q9C0E2 1151 aaKnown RBP15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 SHTN1A0MZ66 631 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 CCDC191Q8NCU4 936 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 TRPM2O94759 1503 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZNF569Q5MCW4 686 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 KIAA1524Q8TCG1 905 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 DRC1Q96MC2 740 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 USP28Q96RU2 1077 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 STAP2Q9UGK3 403 aa15.57■□□□□ 0.08
TRAPPC8-207ENST00000580104 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 WTAPQ15007 396 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 BAG1Q99933 345 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 USP5P45974 858 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 MTIF2P46199 727 aaKnown RBP15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 POTEB2H3BUK9 544 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 ABCA8O94911 1581 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZNF202O95125 648 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 TDRD12Q587J7 1177 aaKnown RBP15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZFYVE27Q5T4F4 411 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 KANK3Q6NY19 840 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 CACNA2D4Q7Z3S7 1137 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 CATIPQ7Z7H3 387 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 C10orf67Q8IYJ2 551 aa15.56■□□□□ 0.08
TRAPPC8-207ENST00000580104 FKBP15Q5T1M5 1219 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 BRAPQ7Z569 592 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 TCEAL9Q9UHQ7 104 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 RTN1Q16799 776 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 SLC5A1P13866 664 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 ANO1Q5XXA6 986 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 HELBQ8NG08 1087 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 CCDC43Q96MW1 224 aaKnown RBP15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 RNF41Q9H4P4 317 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
TRAPPC8-207ENST00000580104 CCDC194A0A1B0GVG4 234 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 TTF1Q15361 905 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 PPP2R3AQ06190 1150 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 LRRC8AQ8IWT6 810 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 CACTINQ8WUQ7 758 aaKnown RBP15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 CAPZA3Q96KX2 299 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 NBPF6Q5VWK0 638 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 NBPF4Q96M43 638 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 SEPT11Q9NVA2 429 aaKnown RBP15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 GUCA1BQ9UMX6 200 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 CTAGE9A4FU28 777 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 TRIM21P19474 475 aaKnown RBP15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 PAFAH1B1P43034 410 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 TAF4BQ92750 862 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 PDLIM2Q96JY6 352 aa15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAPPC8-207ENST00000580104 GABPB1Q06547 395 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC8-207ENST00000580104 TRIM47Q96LD4 638 aa15.53■□□□□ 0.08
TRAPPC8-207ENST00000580104 A0A1B0GUL7 405 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms