RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 TMED8Q6PL24 325 aaPredicted RBP7.76□□□□□ -1.17
RTTN-204ENST00000579986 LSG1Q9H089 658 aaKnown RBP7.76□□□□□ -1.17
RTTN-204ENST00000579986 PSME4Q14997 1843 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 NPR1P16066 1061 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 PDE6BP35913 854 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 SCARF1Q14162 830 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 UPF1Q92900 1129 aaKnown RBP eCLIP7.76□□□□□ -1.17
RTTN-204ENST00000579986 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 LEMD3Q9Y2U8 911 aa7.76□□□□□ -1.17
RTTN-204ENST00000579986 SP8Q8IXZ3 490 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 C22orf23Q9BZE7 217 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 BOLA2Q9H3K6 86 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 REC8O95072 547 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
RTTN-204ENST00000579986 C7orf43Q8WVR3 580 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 HELLSQ9NRZ9 838 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 SLX4Q8IY92 1834 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 XDHP47989 1333 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 SALL1Q9NSC2 1324 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 TCRBV5S4A2TA0A5A2 114 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 IFIT1P09914 478 aaKnown RBP7.75□□□□□ -1.17
RTTN-204ENST00000579986 ANAPC15P60006 121 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 ZMYM1Q5SVZ6 1142 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 FAM84BQ96KN1 310 aaPredicted RBP7.75□□□□□ -1.17
RTTN-204ENST00000579986 ATP6V0A2Q9Y487 856 aa7.75□□□□□ -1.17
RTTN-204ENST00000579986 TIAM2Q8IVF5 1701 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 TRIM6-TRIM34B2RNG4 842 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
RTTN-204ENST00000579986 PHKA1P46020 1223 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 TTF1Q15361 905 aaPredicted RBP7.74□□□□□ -1.17
RTTN-204ENST00000579986 RILPL2Q969X0 211 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 MASTLQ96GX5 879 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 NEUROD6Q96NK8 337 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 RTFDC1Q9BY42 306 aaPredicted RBP7.74□□□□□ -1.17
RTTN-204ENST00000579986 HMG20BQ9P0W2 317 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 TAF5LO75529 589 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 ZFYP08048 801 aaPredicted RBP7.74□□□□□ -1.17
RTTN-204ENST00000579986 HSPA4P34932 840 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 TSGA10IPQ3SY00 556 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 TTC39AQ5SRH9 613 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 RPGRQ92834 1020 aaKnown RBP7.74□□□□□ -1.17
RTTN-204ENST00000579986 MAP4K1Q92918 833 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 SNX21Q969T3 373 aa7.74□□□□□ -1.17
RTTN-204ENST00000579986 CCDC88AQ3V6T2 1871 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 A0A0D9SFI3 127 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 ALDH1B1P30837 517 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 NMIQ13287 307 aaPredicted RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 RASGRF1Q13972 1273 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 SPATA5Q8NB90 893 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 RUFY2Q8WXA3 655 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 UPF2Q9HAU5 1272 aaKnown RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 DDX60LQ5H9U9 1706 aaKnown RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 IL1R1P14778 569 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 ZAP70P43403 619 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 MFAP1P55081 439 aaKnown RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 GPSM2P81274 684 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 UBE3CQ15386 1083 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 PIAS4Q8N2W9 510 aaPredicted RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 CCDC24Q8N4L8 307 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 HELBQ8NG08 1087 aaPredicted RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 EDC3Q96F86 508 aaKnown RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 PDGFDQ9GZP0 370 aaPredicted RBP7.73□□□□□ -1.17
RTTN-204ENST00000579986 FOCADQ5VW36 1801 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 ARFGEF1Q9Y6D6 1849 aa7.73□□□□□ -1.17
RTTN-204ENST00000579986 WTIPA6NIX2 430 aaPredicted RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 RNF113AO15541 343 aaKnown RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 KCNA3P22001 575 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 NECTIN1Q15223 517 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 ANTXR1Q9H6X2 564 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 PIH1D3Q9NQM4 214 aaKnown RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 ZMYM6O95789 1325 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 PPEF1O14829 653 aaPredicted RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 FOXP2O15409 715 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 ADD2P35612 726 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 BCAMP50895 628 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 GRIPAP1Q4V328 841 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 TDRD7Q8NHU6 1098 aaKnown RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 FAM227BQ96M60 508 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 IPO9Q96P70 1041 aaKnown RBP7.72□□□□□ -1.17
RTTN-204ENST00000579986 CCDC171Q6TFL3 1326 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 FER1L6Q2WGJ9 1857 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 GOLIM4O00461 696 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 KLRK1P26718 216 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 MCMDC2Q4G0Z9 681 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 FSD1Q9BTV5 496 aa7.72□□□□□ -1.17
RTTN-204ENST00000579986 RPAP1Q9BWH6 1393 aaPredicted RBP7.71□□□□□ -1.17
RTTN-204ENST00000579986 SNAP23O00161 211 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 LRRFIP1Q32MZ4 808 aaKnown RBP7.71□□□□□ -1.17
RTTN-204ENST00000579986 DDRGK1Q96HY6 314 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 DSCC1Q9BVC3 393 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 MTFR1LQ9H019 292 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 BCL11AQ9H165 835 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 DIAPH3Q9NSV4 1193 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 DENND2AQ9ULE3 1009 aa7.71□□□□□ -1.17
RTTN-204ENST00000579986 CHD4Q14839 1912 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms