RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 ANKIB1Q9P2G1 1089 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
PPP4R1-212ENST00000579415 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 EIF4G2P78344 907 aaKnown RBP eCLIP10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 VCANP13611 3396 aa10.53□□□□□ -0.72
PPP4R1-212ENST00000579415 PER1O15534 1290 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 PPP1R12BO60237 982 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 HSPA5P11021 654 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 GJA5P36382 358 aa10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 MMP14P50281 582 aa10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 DEFB129Q9H1M3 183 aa10.52□□□□□ -0.73
PPP4R1-212ENST00000579415 SASH1O94885 1247 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 GJA8P48165 433 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 MTFR1Q15390 333 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 PROSER3Q2NL68 480 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 DACT2Q5SW24 774 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 Q7L0L9 218 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 COPS6Q7L5N1 327 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 FAM89AQ96GI7 184 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 ZFYVE28Q9HCC9 887 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 MTMR10Q9NXD2 777 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 STAP2Q9UGK3 403 aa10.51□□□□□ -0.73
PPP4R1-212ENST00000579415 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 GNRH1P01148 92 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 ANXA1P04083 346 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 GJB1P08034 283 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 PRMT2P55345 433 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 MXD3Q9BW11 206 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 NUDCQ9Y266 331 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 SPTBN5Q9NRC6 3674 aaKnown RBP10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 MYO3BQ8WXR4 1341 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 SCN9AQ15858 1988 aa10.5□□□□□ -0.73
PPP4R1-212ENST00000579415 EVI5O60447 810 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 U2AF1L5P0DN76 240 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 BMP8BP34820 402 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 U2AF1Q01081 240 aaKnown RBP eCLIP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 AIMP1Q12904 312 aaKnown RBP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 KIF22Q14807 665 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 STRIP1Q5VSL9 837 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 XAGE3Q8WTP9 111 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 LAMB4A4D0S4 1761 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
PPP4R1-212ENST00000579415 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 IREB2P48200 963 aaKnown RBP10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 LACTBP83111 547 aaPredicted RBP10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 SUPT20HL1Q3ZLR7 823 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 ANKRD13AQ8IZ07 590 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 CFAP53Q96M91 514 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 ARHGAP39Q9C0H5 1083 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 PPP2R3BQ9Y5P8 575 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 XDHP47989 1333 aa10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 COL1A1P02452 1464 aaPredicted RBP10.48□□□□□ -0.73
PPP4R1-212ENST00000579415 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 USP2O75604 605 aaPredicted RBP10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 FARP2O94887 1054 aaPredicted RBP10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 CCL5P13501 91 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 ATP2B4P23634 1241 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 BRI3BPQ8WY22 251 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 OPTNQ96CV9 577 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 GDF15Q99988 308 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 SSC5DA1L4H1 1573 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 COL4A1P02462 1669 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 LAMB2P55268 1798 aa10.47□□□□□ -0.73
PPP4R1-212ENST00000579415 TLR2O60603 784 aa10.46□□□□□ -0.73
PPP4R1-212ENST00000579415 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
PPP4R1-212ENST00000579415 FAM43AQ8N2R8 423 aa10.46□□□□□ -0.73
PPP4R1-212ENST00000579415 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.73
PPP4R1-212ENST00000579415 RNF208Q9H0X6 261 aa10.46□□□□□ -0.73
PPP4R1-212ENST00000579415 TAF1P21675 1872 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 CCL15-CCL14A0A0B4J2E2 113 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 WDHD1O75717 1129 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 GRK4P32298 578 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 GTF2A2P52657 109 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 CCL15Q16663 113 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 NBPF12Q5TAG4 269 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 U2AF1L4Q8WU68 220 aaKnown RBP10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 ELP3Q9H9T3 547 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 SRRDQ9UH36 339 aa10.45□□□□□ -0.74
PPP4R1-212ENST00000579415 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
PPP4R1-212ENST00000579415 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
PPP4R1-212ENST00000579415 COL9A1P20849 921 aa10.44□□□□□ -0.74
PPP4R1-212ENST00000579415 BCAMP50895 628 aa10.44□□□□□ -0.74
PPP4R1-212ENST00000579415 TRIM28Q13263 835 aaKnown RBP10.44□□□□□ -0.74
PPP4R1-212ENST00000579415 DLGAP5Q15398 846 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms