RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 HOXD8P13378 290 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 CD68P34810 354 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 SOX18P35713 384 aa7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 C11orf91Q3C1V1 193 aa7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 CBLL1Q75N03 491 aa7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 FAM20CQ8IXL6 584 aa7.69□□□□□ -1.18
TRAPPC8-206ENST00000578886 TMEM88BA6NKF7 163 aa7.68□□□□□ -1.18
TRAPPC8-206ENST00000578886 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 TNFRSF10BO14763 440 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 MICAL2O94851 1124 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 SCNN1AP37088 669 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 USP20Q9Y2K6 914 aa7.67□□□□□ -1.18
TRAPPC8-206ENST00000578886 SUPT5HO00267 1087 aaKnown RBP7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 OPLAHO14841 1288 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 XYLBO75191 536 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 HOXA10P31260 410 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 NAA30Q147X3 362 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 C16orf46Q6P387 395 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 KIAA1211Q6ZU35 1233 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 BEND4Q6ZU67 534 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 ETFBKMTQ8IXQ9 262 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 COL26A1Q96A83 441 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 KCNK4Q9NYG8 393 aa7.66□□□□□ -1.18
TRAPPC8-206ENST00000578886 WDR64B1ANS9 1081 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 LINC01387J3KSC0 135 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 MMP20O60882 483 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 JUNBP17275 347 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 ITGB5P18084 799 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 TREML1Q86YW5 311 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 KCNF1Q9H3M0 494 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 SEPT3Q9UH03 358 aa7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
TRAPPC8-206ENST00000578886 DUOXA2Q1HG44 320 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 MSMPQ1L6U9 139 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 TXNDC11Q6PKC3 985 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 FBXL18Q96ME1 805 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 CCDC39Q9UFE4 941 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 HIF3AQ9Y2N7 669 aa7.64□□□□□ -1.19
TRAPPC8-206ENST00000578886 TM4SF5O14894 197 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 SART1O43290 800 aaKnown RBP7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 PRNPP04156 253 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 BMP3P12645 472 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 VSIG10LQ86VR7 867 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 GIMAP7Q8NHV1 300 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
TRAPPC8-206ENST00000578886 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
TRAPPC8-206ENST00000578886 KLHL23Q8NBE8 558 aa7.62□□□□□ -1.19
TRAPPC8-206ENST00000578886 ZBTB39O15060 712 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 CPSF6Q16630 551 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 FBLN7Q53RD9 439 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 RGL4Q8IZJ4 473 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 MFSD14AQ96MC6 490 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 ARID3AQ99856 593 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 CARD10Q9BWT7 1032 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
TRAPPC8-206ENST00000578886 FSCN2O14926 492 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 FOSL1P15407 271 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 PREPP48147 710 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 TRIP4Q15650 581 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 PHLDB3Q6NSJ2 640 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 TP53INP2Q8IXH6 220 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 CMTR1Q8N1G2 835 aaKnown RBP7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 FOXD4L4Q8WXT5 416 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
TRAPPC8-206ENST00000578886 BRD2P25440 801 aaKnown RBP7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 SSFA2P28290 1259 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 CDC27P30260 824 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 FAM117BQ6P1L5 589 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 NFXL1Q6ZNB6 911 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 LACRTQ9GZZ8 138 aa7.59□□□□□ -1.19
TRAPPC8-206ENST00000578886 ADAM11O75078 769 aa7.58□□□□□ -1.2
TRAPPC8-206ENST00000578886 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 SMNDC1O75940 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 ZAP70P43403 619 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 OSBPL1AQ9BXW6 950 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 RNF208Q9H0X6 261 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 STIM2Q9P246 746 aa7.57□□□□□ -1.2
TRAPPC8-206ENST00000578886 DDX3YO15523 660 aaKnown RBP7.56□□□□□ -1.2
TRAPPC8-206ENST00000578886 ATP11AP98196 1134 aa7.56□□□□□ -1.2
TRAPPC8-206ENST00000578886 FDX2Q6P4F2 183 aa7.56□□□□□ -1.2
TRAPPC8-206ENST00000578886 ERICH6Q7L0X2 663 aa7.56□□□□□ -1.2
TRAPPC8-206ENST00000578886 NLRP13Q86W25 1043 aa7.56□□□□□ -1.2
TRAPPC8-206ENST00000578886 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 F13BP05160 661 aa7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 MAP4P27816 1152 aaKnown RBP7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 CDC25BP30305 580 aa7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 ZNF648Q5T619 568 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 ATCAYQ86WG3 371 aa7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 AGBL5Q8NDL9 886 aa7.55□□□□□ -1.2
TRAPPC8-206ENST00000578886 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms