RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 ZBTB48P10074 688 aaPredicted RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 PARP10Q53GL7 1025 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 AMER1Q5JTC6 1135 aaPredicted RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 DDX46Q7L014 1031 aaKnown RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 MCM10Q7L590 875 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 LRP10Q7Z4F1 713 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 TBC1D16Q8TBP0 767 aa8.26□□□□□ -1.09
UBB-208ENST00000578706 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 UTP14AQ9BVJ6 771 aaKnown RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
UBB-208ENST00000578706 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
UBB-208ENST00000578706 WNT10BO00744 389 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 MYL6BP14649 208 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 ARMC9Q7Z3E5 817 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 TMC4Q7Z404 712 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 NECTIN2Q92692 538 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 GDF15Q99988 308 aa8.25□□□□□ -1.09
UBB-208ENST00000578706 RRP7AQ9Y3A4 280 aaKnown RBP8.25□□□□□ -1.09
UBB-208ENST00000578706 SASH1O94885 1247 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 NF2P35240 595 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 PLA2G5P39877 138 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 GJA8P48165 433 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 DCTN1Q14203 1278 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 MAP3K11Q16584 847 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 HTATIP2Q9BUP3 242 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 MXD3Q9BW11 206 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.24□□□□□ -1.09
UBB-208ENST00000578706 NR2E3Q9Y5X4 410 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 CDH23Q9H251 3354 aa8.24□□□□□ -1.09
UBB-208ENST00000578706 CTGFP29279 349 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 BMP8BP34820 402 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 BCAMP50895 628 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 LRIT3Q3SXY7 679 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 CC2D1BQ5T0F9 858 aaKnown RBP8.23□□□□□ -1.09
UBB-208ENST00000578706 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 CNKSR2Q8WXI2 1034 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 ZNF428Q96B54 188 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 SLC10A4Q96EP9 437 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 EYA3Q99504 573 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 ECM29Q5VYK3 1845 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 RPTORQ8N122 1335 aa8.23□□□□□ -1.09
UBB-208ENST00000578706 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
UBB-208ENST00000578706 GJB1P08034 283 aa8.22□□□□□ -1.09
UBB-208ENST00000578706 HOXD11P31277 338 aaPredicted RBP8.22□□□□□ -1.09
UBB-208ENST00000578706 PRKAR2BP31323 418 aa8.22□□□□□ -1.09
UBB-208ENST00000578706 ZBED3Q96IU2 234 aaPredicted RBP8.22□□□□□ -1.09
UBB-208ENST00000578706 THUMPD2Q9BTF0 503 aaKnown RBP8.22□□□□□ -1.09
UBB-208ENST00000578706 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
UBB-208ENST00000578706 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
UBB-208ENST00000578706 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
UBB-208ENST00000578706 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
UBB-208ENST00000578706 COL1A1P02452 1464 aaPredicted RBP8.21□□□□□ -1.09
UBB-208ENST00000578706 COL2A1P02458 1487 aaPredicted RBP8.21□□□□□ -1.09
UBB-208ENST00000578706 UFL1O94874 794 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 PDIA6Q15084 440 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 TAF7Q15545 349 aaPredicted RBP8.21□□□□□ -1.1
UBB-208ENST00000578706 PROSER3Q2NL68 480 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 DACT2Q5SW24 774 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 FAM43AQ8N2R8 423 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 ZC3H12CQ9C0D7 883 aaKnown RBP8.21□□□□□ -1.1
UBB-208ENST00000578706 SH3TC1Q8TE82 1336 aa8.21□□□□□ -1.1
UBB-208ENST00000578706 HTATSF1O43719 755 aaKnown RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 EVI5O60447 810 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 ANXA1P04083 346 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 CCL5P13501 91 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 LACTBP83111 547 aaPredicted RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 CNGB1Q14028 1251 aaPredicted RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 SF3B3Q15393 1217 aaKnown RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 OTUD7BQ6GQQ9 843 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 PRKRIP1Q9H875 184 aaPredicted RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 TRMT112Q9UI30 125 aaKnown RBP8.2□□□□□ -1.1
UBB-208ENST00000578706 NCOR1O75376 2440 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 PIEZO1Q92508 2521 aa8.2□□□□□ -1.1
UBB-208ENST00000578706 USP17L3A6NCW0 530 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 USP17L4A6NCW7 530 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
UBB-208ENST00000578706 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
UBB-208ENST00000578706 USP17L1Q7RTZ2 530 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 APOBEC3FQ8IUX4 373 aaKnown RBP8.19□□□□□ -1.1
UBB-208ENST00000578706 NKX2-3Q8TAU0 364 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 PNISRQ8TF01 805 aaKnown RBP8.19□□□□□ -1.1
UBB-208ENST00000578706 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
UBB-208ENST00000578706 CFAP53Q96M91 514 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 DEFB129Q9H1M3 183 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 AOX1Q06278 1338 aa8.19□□□□□ -1.1
UBB-208ENST00000578706 MGAMO43451 1857 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 UNCXA6NJT0 531 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 USP2O75604 605 aaPredicted RBP8.18□□□□□ -1.1
UBB-208ENST00000578706 ECM2O94769 699 aaPredicted RBP8.18□□□□□ -1.1
UBB-208ENST00000578706 U2AF1L5P0DN76 240 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms