RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TNS4Q8IZW8 715 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 CRIPAKQ8N1N5 446 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 ZNF516Q92618 1163 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 PIM2Q9P1W9 311 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 SOS1Q07889 1333 aaPredicted RBP5.45□□□□□ -1.54
PTPRM-206ENST00000578093 KDM2BQ8NHM5 1336 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 ADAMTSL1Q8N6G6 1762 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 COL15A1P39059 1388 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 NFKBIEO00221 500 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 TLL1O43897 1013 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 JUNDP17535 347 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 HMGB2P26583 209 aaKnown RBP5.44□□□□□ -1.54
PTPRM-206ENST00000578093 TM4SF1P30408 202 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 CABP4P57796 275 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 USPL1Q5W0Q7 1092 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 DNAJC10Q8IXB1 793 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 SLC6A16Q9GZN6 736 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 ZBTB1Q9Y2K1 713 aa5.44□□□□□ -1.54
PTPRM-206ENST00000578093 HSP90AB1P08238 724 aaKnown RBP5.43□□□□□ -1.54
PTPRM-206ENST00000578093 GGCXP38435 758 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 CTDSPL2Q05D32 466 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 SLC39A6Q13433 755 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 NFIXQ14938 502 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 CDCA8Q53HL2 280 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 FAM160A2Q8N612 972 aaPredicted RBP5.43□□□□□ -1.54
PTPRM-206ENST00000578093 NFATC2IPQ8NCF5 419 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 PNMA1Q8ND90 353 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 POLR3GLQ9BT43 218 aa5.43□□□□□ -1.54
PTPRM-206ENST00000578093 THSD7BQ9C0I4 1608 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 SCN4AP35499 1836 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 RAD21O60216 631 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 DXOO77932 396 aaKnown RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 CYP19A1P11511 503 aaPredicted RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 GMPRP36959 345 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 MTHFSP49914 203 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 MMP16P51512 607 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 MCM6Q14566 821 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 PTPRNQ16849 979 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 PLEKHO1Q53GL0 409 aaPredicted RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 SULT6B1Q6IMI4 303 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 LYPD8Q6UX82 237 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 CCDC24Q8N4L8 307 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 EMID1Q96A84 441 aaPredicted RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 LGR6Q9HBX8 967 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 COL3A1P02461 1466 aaPredicted RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 LTBP1Q14766 1721 aa5.42□□□□□ -1.54
PTPRM-206ENST00000578093 ZC3H4Q9UPT8 1303 aaKnown RBP5.42□□□□□ -1.54
PTPRM-206ENST00000578093 TNRC18O15417 2968 aaPredicted RBP5.41□□□□□ -1.54
PTPRM-206ENST00000578093 GLTPD2A6NH11 291 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 SERPINB2P05120 415 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 LMNB1P20700 586 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 IL13P35225 146 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 AMOTQ4VCS5 1084 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 C1orf141Q5JVX7 400 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 C2CD5Q86YS7 1000 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 WWC1Q8IX03 1113 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 SLC52A2Q9HAB3 445 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 SNRKQ9NRH2 765 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 MKRN1Q9UHC7 482 aaKnown RBP5.41□□□□□ -1.54
PTPRM-206ENST00000578093 NARFQ9UHQ1 456 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 LAMB4A4D0S4 1761 aa5.41□□□□□ -1.54
PTPRM-206ENST00000578093 COL4A5P29400 1685 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 FOXN1O15353 648 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 RNMTO43148 476 aaKnown RBP5.4□□□□□ -1.54
PTPRM-206ENST00000578093 CCNYL3P0C7X3 344 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 VEGFAP15692 232 aaPredicted RBP5.4□□□□□ -1.54
PTPRM-206ENST00000578093 CTHP32929 405 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 TBC1D9BQ66K14 1250 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 BICDL1Q6ZP65 573 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 NKX2-3Q8TAU0 364 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 LRRN4Q8WUT4 740 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 NUDT12Q9BQG2 462 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 PANK3Q9H999 370 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 PRDM9Q9NQV7 894 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 NDUFB9Q9Y6M9 179 aa5.4□□□□□ -1.54
PTPRM-206ENST00000578093 PER1O15534 1290 aaPredicted RBP5.39□□□□□ -1.55
PTPRM-206ENST00000578093 C21orf2O43822 256 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 S1PR4O95977 384 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 HMOX1P09601 288 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 HSPA5P11021 654 aaKnown RBP5.39□□□□□ -1.55
PTPRM-206ENST00000578093 CANXP27824 592 aaKnown RBP5.39□□□□□ -1.55
PTPRM-206ENST00000578093 AKAP4Q5JQC9 854 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 PRR5LQ6MZQ0 368 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 TMEM151AQ8N4L1 468 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 TTLL6Q8N841 843 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 ARMC2Q8NEN0 867 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 ZMYND15Q9H091 742 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 CNTNAP1P78357 1384 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 SNED1Q8TER0 1413 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 TRPM7Q96QT4 1865 aa5.39□□□□□ -1.55
PTPRM-206ENST00000578093 DDNO94850 711 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-206ENST00000578093 EIF5P55010 431 aaKnown RBP5.38□□□□□ -1.55
PTPRM-206ENST00000578093 KCNH2Q12809 1159 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 MTHFSDQ2M296 383 aaKnown RBP5.38□□□□□ -1.55
PTPRM-206ENST00000578093 SLC51AQ86UW1 340 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 MORC1Q86VD1 984 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF622Q969S3 477 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms