RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ZSCAN31Q96LW9 406 aaPredicted RBP33.09■■■□□ 2.89
LIMD2-203ENST00000578067 BAG4O95429 457 aaKnown RBP33.09■■■□□ 2.89
LIMD2-203ENST00000578067 BCL11BQ9C0K0 894 aaPredicted RBP33.09■■■□□ 2.89
LIMD2-203ENST00000578067 SRP68Q9UHB9 627 aaKnown RBP33.09■■■□□ 2.89
LIMD2-203ENST00000578067 ZDHHC9Q9Y397 364 aa33.09■■■□□ 2.89
LIMD2-203ENST00000578067 TRAK2O60296 914 aa33.08■■■□□ 2.89
LIMD2-203ENST00000578067 ARID4AP29374 1257 aaPredicted RBP33.08■■■□□ 2.89
LIMD2-203ENST00000578067 SF3B3Q15393 1217 aaKnown RBP33.08■■■□□ 2.89
LIMD2-203ENST00000578067 CDC5LQ99459 802 aaKnown RBP33.08■■■□□ 2.89
LIMD2-203ENST00000578067 LARP6Q9BRS8 491 aaKnown RBP33.08■■■□□ 2.89
LIMD2-203ENST00000578067 SLC10A5Q5PT55 438 aa33.07■■■□□ 2.89
LIMD2-203ENST00000578067 ALDH8A1Q9H2A2 487 aaPredicted RBP33.07■■■□□ 2.89
LIMD2-203ENST00000578067 RPS6KB1P23443 525 aa33.07■■■□□ 2.88
LIMD2-203ENST00000578067 PHKA1P46020 1223 aa33.07■■■□□ 2.88
LIMD2-203ENST00000578067 TTF1Q15361 905 aaPredicted RBP33.07■■■□□ 2.88
LIMD2-203ENST00000578067 OSBP2Q969R2 916 aa33.07■■■□□ 2.88
LIMD2-203ENST00000578067 NYXQ9GZU5 481 aa33.07■■■□□ 2.88
LIMD2-203ENST00000578067 ARAP2Q8WZ64 1704 aa33.07■■■□□ 2.88
LIMD2-203ENST00000578067 M0R2C6 588 aa33.06■■■□□ 2.88
LIMD2-203ENST00000578067 SH2B1Q9NRF2 756 aaPredicted RBP33.06■■■□□ 2.88
LIMD2-203ENST00000578067 CYP21A2P08686 494 aa33.06■■■□□ 2.88
LIMD2-203ENST00000578067 GTF2E1P29083 439 aaPredicted RBP33.06■■■□□ 2.88
LIMD2-203ENST00000578067 SETDB2Q96T68 719 aa33.06■■■□□ 2.88
LIMD2-203ENST00000578067 TAF1LQ8IZX4 1826 aa33.05■■■□□ 2.88
LIMD2-203ENST00000578067 GOLGA6L22H0YM25 854 aa33.05■■■□□ 2.88
LIMD2-203ENST00000578067 HSPD1P10809 573 aaKnown RBP33.05■■■□□ 2.88
LIMD2-203ENST00000578067 ARHGEF1Q92888 912 aaKnown RBP33.05■■■□□ 2.88
LIMD2-203ENST00000578067 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.05■■■□□ 2.88
LIMD2-203ENST00000578067 AKAP11Q9UKA4 1901 aa33.05■■■□□ 2.88
LIMD2-203ENST00000578067 ANKRD1Q15327 319 aa33.04■■■□□ 2.88
LIMD2-203ENST00000578067 WASHC4Q2M389 1173 aa33.04■■■□□ 2.88
LIMD2-203ENST00000578067 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.04■■■□□ 2.88
LIMD2-203ENST00000578067 APPBP2Q92624 585 aa33.04■■■□□ 2.88
LIMD2-203ENST00000578067 ZSCAN25Q6NSZ9 544 aa33.03■■■□□ 2.88
LIMD2-203ENST00000578067 C3orf67Q6ZVT6 689 aa33.03■■■□□ 2.88
LIMD2-203ENST00000578067 NEK1Q96PY6 1258 aa33.03■■■□□ 2.88
LIMD2-203ENST00000578067 LARGE1O95461 756 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 COL9A3Q14050 684 aaPredicted RBP33.02■■■□□ 2.88
LIMD2-203ENST00000578067 AMIGO3Q86WK7 504 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 C4BP0C0L5 1744 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 BRD1O95696 1058 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 CHRNDQ07001 517 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 ANKRD18AQ8IVF6 992 aa33.02■■■□□ 2.88
LIMD2-203ENST00000578067 NBPF5PQ86XG9 351 aaPredicted RBP33.01■■■□□ 2.87
LIMD2-203ENST00000578067 SNAP23O00161 211 aa33■■■□□ 2.87
LIMD2-203ENST00000578067 TRAPPC3LQ5T215 181 aa32.99■■■□□ 2.87
LIMD2-203ENST00000578067 PIH1D3Q9NQM4 214 aaKnown RBP32.99■■■□□ 2.87
LIMD2-203ENST00000578067 TPCN1Q9ULQ1 816 aa32.99■■■□□ 2.87
LIMD2-203ENST00000578067 COL24A1Q17RW2 1714 aa32.99■■■□□ 2.87
LIMD2-203ENST00000578067 ME3Q16798 604 aa32.99■■■□□ 2.87
LIMD2-203ENST00000578067 SKOR2Q2VWA4 1001 aaPredicted RBP32.99■■■□□ 2.87
LIMD2-203ENST00000578067 ADD2P35612 726 aa32.98■■■□□ 2.87
LIMD2-203ENST00000578067 TPTE2Q6XPS3 522 aa32.98■■■□□ 2.87
LIMD2-203ENST00000578067 FAM196AQ6ZSG2 479 aa32.98■■■□□ 2.87
LIMD2-203ENST00000578067 RFC4P35249 363 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 CCDC83Q8IWF9 413 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 TCEANC2Q96MN5 208 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 PUS7LQ9H0K6 701 aaKnown RBP32.97■■■□□ 2.87
LIMD2-203ENST00000578067 BSDC1Q9NW68 430 aaPredicted RBP32.97■■■□□ 2.87
LIMD2-203ENST00000578067 SMC3Q9UQE7 1217 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 COL4A1P02462 1669 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 TOB2Q14106 344 aaPredicted RBP32.97■■■□□ 2.87
LIMD2-203ENST00000578067 SPATA5Q8NB90 893 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 LRRC4BQ9NT99 713 aa32.97■■■□□ 2.87
LIMD2-203ENST00000578067 MYH7P12883 1935 aa32.96■■■□□ 2.87
LIMD2-203ENST00000578067 SLC9C2Q5TAH2 1124 aa32.96■■■□□ 2.87
LIMD2-203ENST00000578067 NLRP3Q96P20 1036 aa32.96■■■□□ 2.87
LIMD2-203ENST00000578067 HMGB1P09429 215 aaKnown RBP32.95■■■□□ 2.87
LIMD2-203ENST00000578067 MCTP1Q6DN14 999 aa32.95■■■□□ 2.87
LIMD2-203ENST00000578067 PHF14O94880 888 aa32.95■■■□□ 2.87
LIMD2-203ENST00000578067 UBE3CQ15386 1083 aa32.95■■■□□ 2.87
LIMD2-203ENST00000578067 STOX1Q6ZVD7 989 aa32.95■■■□□ 2.87
LIMD2-203ENST00000578067 CTNNA3Q9UI47 895 aa32.95■■■□□ 2.87
LIMD2-203ENST00000578067 IDH1O75874 414 aaKnown RBP32.94■■■□□ 2.86
LIMD2-203ENST00000578067 RASGRF1Q13972 1273 aa32.94■■■□□ 2.86
LIMD2-203ENST00000578067 KRT27Q7Z3Y8 459 aa32.94■■■□□ 2.86
LIMD2-203ENST00000578067 WDR33Q9C0J8 1336 aaKnown RBP32.94■■■□□ 2.86
LIMD2-203ENST00000578067 CASZ1Q86V15 1759 aa32.93■■■□□ 2.86
LIMD2-203ENST00000578067 FOXD4L5Q5VV16 416 aaPredicted RBP32.93■■■□□ 2.86
LIMD2-203ENST00000578067 FOXD4L4Q8WXT5 416 aaPredicted RBP32.93■■■□□ 2.86
LIMD2-203ENST00000578067 GPAA1O43292 621 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 BCAMP50895 628 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 ST3GAL1Q11201 340 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 C4AP0C0L4 1744 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 FOXP2O15409 715 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 ADRA2BP18089 450 aa32.92■■■□□ 2.86
LIMD2-203ENST00000578067 NECAB1Q8N987 351 aa32.91■■■□□ 2.86
LIMD2-203ENST00000578067 E7EWF7 191 aa32.9■■■□□ 2.86
LIMD2-203ENST00000578067 PDE6AP16499 860 aa32.9■■■□□ 2.86
LIMD2-203ENST00000578067 CELF1Q92879 486 aaKnown RBP32.9■■■□□ 2.86
LIMD2-203ENST00000578067 MINPP1Q9UNW1 487 aa32.9■■■□□ 2.86
LIMD2-203ENST00000578067 ZNF532Q9HCE3 1301 aa32.9■■■□□ 2.86
LIMD2-203ENST00000578067 UBE4AQ14139 1066 aa32.9■■■□□ 2.86
LIMD2-203ENST00000578067 DHX32Q7L7V1 743 aaKnown RBP32.9■■■□□ 2.86
LIMD2-203ENST00000578067 A0A0G2JLW4 131 aa32.89■■■□□ 2.86
LIMD2-203ENST00000578067 SLC27A3Q5K4L6 730 aa32.89■■■□□ 2.86
LIMD2-203ENST00000578067 TTLL5Q6EMB2 1281 aa32.89■■■□□ 2.86
LIMD2-203ENST00000578067 Q6ZUG5 572 aa32.89■■■□□ 2.86
LIMD2-203ENST00000578067 GZF1Q9H116 711 aaPredicted RBP32.89■■■□□ 2.86
LIMD2-203ENST00000578067 WWC3Q9ULE0 1092 aa32.89■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms