RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
SUPT6H-204ENST00000577939 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 CELF2O95319 508 aaKnown RBP12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 FOXO4P98177 505 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 KRT26Q7Z3Y9 468 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 GLIS2Q9BZE0 524 aaPredicted RBP12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 AKAP11Q9UKA4 1901 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 UTYO14607 1347 aa12.79□□□□□ -0.36
SUPT6H-204ENST00000577939 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 PITPNM2Q9BZ72 1349 aa12.78□□□□□ -0.36
SUPT6H-204ENST00000577939 TRAF5O00463 557 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 VEGFBP49765 207 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 HHIPL1Q96JK4 782 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 TLL2Q9Y6L7 1015 aa12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
SUPT6H-204ENST00000577939 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 HIRAP54198 1017 aaPredicted RBP12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 C15orf52Q6ZUT6 534 aaKnown RBP12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 CAPNS2Q96L46 248 aa12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
SUPT6H-204ENST00000577939 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 C2orf69Q8N8R5 385 aa12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 BICC1Q9H694 974 aaKnown RBP12.75□□□□□ -0.37
SUPT6H-204ENST00000577939 TAF5LO75529 589 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 GRM1Q13255 1194 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 EPHA10Q5JZY3 1008 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 GMLQ99445 158 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 CD209Q9NNX6 404 aa12.74□□□□□ -0.37
SUPT6H-204ENST00000577939 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 PLIN1O60240 522 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 EGFRP00533 1210 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 NF2P35240 595 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 HUNKP57058 714 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 GTF2IP78347 998 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 SCARF1Q14162 830 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 CST9Q5W186 159 aa12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
SUPT6H-204ENST00000577939 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 CA12O43570 354 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 MYO1BO43795 1136 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 IL1R1P14778 569 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 KLRK1P26718 216 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 MAP2K2P36507 400 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 FKBP1BP68106 108 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 NOGQ13253 232 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
SUPT6H-204ENST00000577939 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 FMR1Q06787 632 aaKnown RBP eCLIP12.71□□□□□ -0.378e-9■■■□□ 16
SUPT6H-204ENST00000577939 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 CDCA5Q96FF9 252 aa12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
SUPT6H-204ENST00000577939 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
SUPT6H-204ENST00000577939 GNAI3P08754 354 aa12.7□□□□□ -0.38
SUPT6H-204ENST00000577939 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
SUPT6H-204ENST00000577939 HIBADHP31937 336 aaKnown RBP12.7□□□□□ -0.38
SUPT6H-204ENST00000577939 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms