RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
RNF43-203ENST00000577716 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
RNF43-203ENST00000577716 EXOC5O00471 708 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 RXRAP19793 462 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 KIF5BP33176 963 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 LMAN1P49257 510 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 SYT10Q6XYQ8 523 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 CNNM2Q9H8M5 875 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNF43-203ENST00000577716 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 ESR2Q92731 530 aa12.49□□□□□ -0.41
RNF43-203ENST00000577716 NCOA5Q9HCD5 579 aaKnown RBP12.49□□□□□ -0.41
RNF43-203ENST00000577716 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
RNF43-203ENST00000577716 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 ZFYVE16Q7Z3T8 1539 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 GPT2Q8TD30 523 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TSG101Q99816 390 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
RNF43-203ENST00000577716 FGFR1OPO95684 399 aaKnown RBP12.48□□□□□ -0.41
RNF43-203ENST00000577716 CYP7A1P22680 504 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 ZNF76P36508 570 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TERF1P54274 439 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 RRAGBQ5VZM2 374 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 ZNF790Q6PG37 636 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TAX1BP1Q86VP1 789 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
RNF43-203ENST00000577716 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 NDUFB9Q9Y6M9 179 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TRIM75PA6NK02 468 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 BMP15O95972 392 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 MCM6Q14566 821 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 MYRIPQ8NFW9 859 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 PLXNC1O60486 1568 aa12.48□□□□□ -0.41
RNF43-203ENST00000577716 TUBB4AP04350 444 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 PDE4BQ07343 736 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 DHX58Q96C10 678 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
RNF43-203ENST00000577716 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 JAK2O60674 1132 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 LIG1P18858 919 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 SPAG1Q07617 926 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 SLC4A8Q2Y0W8 1093 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
RNF43-203ENST00000577716 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 STX8Q9UNK0 236 aa12.47□□□□□ -0.41
RNF43-203ENST00000577716 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 SHTN1A0MZ66 631 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.41
RNF43-203ENST00000577716 STX17P56962 302 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 ME3Q16798 604 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.46□□□□□ -0.41
RNF43-203ENST00000577716 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 ZPR1O75312 459 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 USP8P40818 1118 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 ZNF75DP51815 510 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
RNF43-203ENST00000577716 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
RNF43-203ENST00000577716 JADE2Q9NQC1 790 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.41
RNF43-203ENST00000577716 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 MPHOSPH10O00566 681 aaKnown RBP12.46□□□□□ -0.42
RNF43-203ENST00000577716 AKR1B10O60218 316 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 CCDC175P0C221 793 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 LTKP29376 864 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 MYL5Q02045 173 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.42
RNF43-203ENST00000577716 IL17REQ8NFR9 667 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 EDC3Q96F86 508 aaKnown RBP12.46□□□□□ -0.42
RNF43-203ENST00000577716 CALML4Q96GE6 196 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.42
RNF43-203ENST00000577716 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 EYA2O00167 538 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 AMPD3Q01432 767 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.42
RNF43-203ENST00000577716 PRM3Q9NNZ6 103 aa12.46□□□□□ -0.42
RNF43-203ENST00000577716 KBTBD3Q8NAB2 608 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 FEZ1Q99689 392 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 CTAGE15A4D2H0 777 aa12.45□□□□□ -0.42
RNF43-203ENST00000577716 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms