RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
RNF43-202ENST00000577625 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
RNF43-202ENST00000577625 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
RNF43-202ENST00000577625 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
RNF43-202ENST00000577625 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
RNF43-202ENST00000577625 ZPR1O75312 459 aa16.48■□□□□ 0.23
RNF43-202ENST00000577625 KIF20AO95235 890 aa16.48■□□□□ 0.23
RNF43-202ENST00000577625 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
RNF43-202ENST00000577625 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
RNF43-202ENST00000577625 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
RNF43-202ENST00000577625 GOLIM4O00461 696 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 PDE8BO95263 885 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 MROH5Q6ZUA9 1318 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 CHGBP05060 677 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
RNF43-202ENST00000577625 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
RNF43-202ENST00000577625 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
RNF43-202ENST00000577625 ZNF589Q86UQ0 364 aaPredicted RBP16.47■□□□□ 0.23
RNF43-202ENST00000577625 TRIM37O94972 964 aa16.46■□□□□ 0.23
RNF43-202ENST00000577625 SASS6Q6UVJ0 657 aa16.46■□□□□ 0.23
RNF43-202ENST00000577625 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
RNF43-202ENST00000577625 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
RNF43-202ENST00000577625 KCNB2Q92953 911 aa16.46■□□□□ 0.23
RNF43-202ENST00000577625 PHF14O94880 888 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 MAP4K1Q92918 833 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 FGFR2P21802 821 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 MCM5P33992 734 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 SCARF1Q14162 830 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 RAB3GAP1Q15042 981 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 NECTIN1Q15223 517 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
RNF43-202ENST00000577625 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
RNF43-202ENST00000577625 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
RNF43-202ENST00000577625 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 RFC4P35249 363 aa16.44■□□□□ 0.22
RNF43-202ENST00000577625 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 SLC27A3Q5K4L6 730 aa16.44■□□□□ 0.22
RNF43-202ENST00000577625 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
RNF43-202ENST00000577625 UPF3BQ9BZI7 483 aaKnown RBP16.44■□□□□ 0.22
RNF43-202ENST00000577625 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 LPIN2Q92539 896 aa16.43■□□□□ 0.22
RNF43-202ENST00000577625 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 TAF5LO75529 589 aa16.43■□□□□ 0.22
RNF43-202ENST00000577625 ADRA2BP18089 450 aa16.43■□□□□ 0.22
RNF43-202ENST00000577625 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
RNF43-202ENST00000577625 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
RNF43-202ENST00000577625 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
RNF43-202ENST00000577625 DOCK2Q92608 1830 aa16.42■□□□□ 0.22
RNF43-202ENST00000577625 MCAMP43121 646 aa16.42■□□□□ 0.22
RNF43-202ENST00000577625 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
RNF43-202ENST00000577625 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
RNF43-202ENST00000577625 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
RNF43-202ENST00000577625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
RNF43-202ENST00000577625 ZAP70P43403 619 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 ARID3AQ99856 593 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
RNF43-202ENST00000577625 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
RNF43-202ENST00000577625 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
RNF43-202ENST00000577625 PHKA1P46020 1223 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 CUL4AQ13619 759 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 CREB3L3Q68CJ9 461 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 TTC14Q96N46 770 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 ZKSCAN5Q9Y2L8 839 aa16.41■□□□□ 0.22
RNF43-202ENST00000577625 SNAP23O00161 211 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 SLC5A1P13866 664 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 KCNJ4P48050 445 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 CHRNDQ07001 517 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 GOLGA6L22H0YM25 854 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 SLC27A2O14975 620 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 RNF113AO15541 343 aaKnown RBP16.4■□□□□ 0.22
RNF43-202ENST00000577625 KLHL40Q2TBA0 621 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 ANKRD18AQ8IVF6 992 aa16.4■□□□□ 0.22
RNF43-202ENST00000577625 SSFA2P28290 1259 aa16.39■□□□□ 0.21
RNF43-202ENST00000577625 NFIXQ14938 502 aa16.39■□□□□ 0.21
RNF43-202ENST00000577625 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
RNF43-202ENST00000577625 PROM2Q8N271 834 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms