RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 BTG4Q9NY30 223 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 GOLGA8BA8MQT2 603 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 KINO60870 393 aaKnown RBP9.97□□□□□ -0.81
RPAIN-215ENST00000575112 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 XRN1Q8IZH2 1706 aaKnown RBP9.97□□□□□ -0.81
RPAIN-215ENST00000575112 HIP1O00291 1037 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 PDCP20941 246 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.81
RPAIN-215ENST00000575112 NECTIN1Q15223 517 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 MCMDC2Q4G0Z9 681 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 PLA2G4DQ86XP0 818 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.81
RPAIN-215ENST00000575112 KIF18AQ8NI77 898 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 LEO1Q8WVC0 666 aaPredicted RBP9.96□□□□□ -0.81
RPAIN-215ENST00000575112 EPC1Q9H2F5 836 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.81
RPAIN-215ENST00000575112 KLF18A0A0U1RQI7 1052 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-215ENST00000575112 ZSCAN31Q96LW9 406 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-215ENST00000575112 ZNF446Q9NWS9 450 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 A0A1B0GVL5 298 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 SLC9C2Q5TAH2 1124 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 KAZALD1Q96I82 304 aa9.96□□□□□ -0.82
RPAIN-215ENST00000575112 DDX41Q9UJV9 622 aaKnown RBP9.96□□□□□ -0.82
RPAIN-215ENST00000575112 LETM1O95202 739 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-215ENST00000575112 ZAP70P43403 619 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 POLA2Q14181 598 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 CCDC112Q8NEF3 446 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 IL17RAQ96F46 866 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
RPAIN-215ENST00000575112 CYP21A2P08686 494 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 GOLPH3LQ9H4A5 285 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 KIF20AO95235 890 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 PTPN12Q05209 780 aaKnown RBP9.95□□□□□ -0.82
RPAIN-215ENST00000575112 CEP135Q66GS9 1140 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-215ENST00000575112 CCAR1Q8IX12 1150 aaKnown RBP9.95□□□□□ -0.82
RPAIN-215ENST00000575112 LRP2BPQ9P2M1 347 aa9.95□□□□□ -0.82
RPAIN-215ENST00000575112 OVOS2A0A0J9YW53 1432 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 OVOS2Q6IE36 1432 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 GOLGA8FQ08AF8 430 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 GOLGA8DPQ0D2H9 430 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 RASSF8Q8NHQ8 419 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 OGFRQ9NZT2 677 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 C3P01024 1663 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 TMEM94Q12767 1356 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 PTPDC1A2A3K4 754 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 RPS6KB1P23443 525 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 PLCD3Q8N3E9 789 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 PHKBQ93100 1093 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 RAI14Q9P0K7 980 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 ORC3Q9UBD5 711 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-215ENST00000575112 COL15A1P39059 1388 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 SMTNL1A8MU46 457 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 TDO2P48775 406 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 ERCC6LQ2NKX8 1250 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 AIDAQ96BJ3 306 aa9.94□□□□□ -0.82
RPAIN-215ENST00000575112 SH2B1Q9NRF2 756 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-215ENST00000575112 ZNF213O14771 459 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 PRDM1O75626 825 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 SKILP12757 684 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 NBPF10Q6P3W6 841 aaKnown RBP9.93□□□□□ -0.82
RPAIN-215ENST00000575112 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 C8orf76Q96K31 380 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 U3KPZ7 1027 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-215ENST00000575112 STARD3NLO95772 234 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 IQCB1Q15051 598 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
RPAIN-215ENST00000575112 XAGE2Q96GT9 111 aa9.93□□□□□ -0.82
RPAIN-215ENST00000575112 IL2RBP14784 551 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 TRIM29Q14134 588 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 TERF2Q15554 542 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 DENND2AQ9ULE3 1009 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 HOMER1Q86YM7 354 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
RPAIN-215ENST00000575112 CCDC69A6NI79 296 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 B4E1Z4 1266 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 FANCGO15287 622 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 PRC1O43663 620 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 CCZ1BP86790 482 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 CCZ1P86791 482 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-215ENST00000575112 SCARF1Q14162 830 aa9.92□□□□□ -0.82
RPAIN-215ENST00000575112 HLFQ16534 295 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms