RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	ZKSCAN2	Q63HK3	967 aa		32.82	■■■□□ 2.84
SRRM2-222	ENST00000575009	PODN	Q7Z5L7	613 aa		32.82	■■■□□ 2.84
SRRM2-222	ENST00000575009	TRPM4	Q8TD43	1214 aa		32.82	■■■□□ 2.84
SRRM2-222	ENST00000575009	CEP350	Q5VT06	3117 aa		32.8	■■■□□ 2.84
SRRM2-222	ENST00000575009	DPF2	Q92785	391 aa		32.8	■■■□□ 2.84
SRRM2-222	ENST00000575009	COA1	Q9GZY4	146 aa		32.8	■■■□□ 2.84
SRRM2-222	ENST00000575009	RIPOR2	Q9Y4F9	1068 aa		32.8	■■■□□ 2.84
SRRM2-222	ENST00000575009	ITGBL1	O95965	494 aa	Predicted RBP	32.79	■■■□□ 2.84
SRRM2-222	ENST00000575009	RFX5	P48382	616 aa	Predicted RBP	32.79	■■■□□ 2.84
SRRM2-222	ENST00000575009	HIRA	P54198	1017 aa	Predicted RBP	32.79	■■■□□ 2.84
SRRM2-222	ENST00000575009	RPS12	P25398	132 aa	Known RBP	32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	SAMD7	Q7Z3H4	446 aa		32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	TMEM57	Q8N5G2	664 aa		32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	FBXW7	Q969H0	707 aa		32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	MXD3	Q9BW11	206 aa		32.78	■■■□□ 2.84
SRRM2-222	ENST00000575009	USP17L3	A6NCW0	530 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	USP17L4	A6NCW7	530 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009		H7C1D1	291 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	EGFR	P00533	1210 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	USP17L1	Q7RTZ2	530 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	CNTROB	Q8N137	903 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	PASK	Q96RG2	1323 aa		32.77	■■■□□ 2.84
SRRM2-222	ENST00000575009	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.75	■■■□□ 2.83
SRRM2-222	ENST00000575009	C15orf52	Q6ZUT6	534 aa	Known RBP	32.75	■■■□□ 2.83
SRRM2-222	ENST00000575009	PTPN12	Q05209	780 aa	Known RBP	32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	DACT2	Q5SW24	774 aa		32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	RBM26	Q5T8P6	1007 aa	Known RBP	32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	GML	Q99445	158 aa		32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	CD209	Q9NNX6	404 aa		32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	MROH5	Q6ZUA9	1318 aa		32.74	■■■□□ 2.83
SRRM2-222	ENST00000575009	GNAI3	P08754	354 aa		32.73	■■■□□ 2.83
SRRM2-222	ENST00000575009	FMR1	Q06787	632 aa	Known RBP eCLIP	32.73	■■■□□ 2.83	9e-16	■□□□□ 8.3
SRRM2-222	ENST00000575009	METTL24	Q5JXM2	366 aa		32.73	■■■□□ 2.83
SRRM2-222	ENST00000575009	ZNF609	O15014	1411 aa		32.73	■■■□□ 2.83
SRRM2-222	ENST00000575009	RLBP1	P12271	317 aa		32.72	■■■□□ 2.83
SRRM2-222	ENST00000575009	AGBL3	Q8NEM8	1001 aa		32.72	■■■□□ 2.83
SRRM2-222	ENST00000575009	UBE4A	Q14139	1066 aa		32.71	■■■□□ 2.83
SRRM2-222	ENST00000575009	DNAJC5G	Q8N7S2	189 aa		32.71	■■■□□ 2.83
SRRM2-222	ENST00000575009	VGLL2	Q8N8G2	317 aa		32.71	■■■□□ 2.83
SRRM2-222	ENST00000575009	EYA2	O00167	538 aa		32.7	■■■□□ 2.83
SRRM2-222	ENST00000575009	GTF2I	P78347	998 aa		32.7	■■■□□ 2.83
SRRM2-222	ENST00000575009	STRIP1	Q5VSL9	837 aa		32.7	■■■□□ 2.83
SRRM2-222	ENST00000575009	ZNF804A	Q7Z570	1209 aa		32.7	■■■□□ 2.83
SRRM2-222	ENST00000575009	SIL1	Q9H173	461 aa		32.7	■■■□□ 2.83
SRRM2-222	ENST00000575009	GYG1	P46976	350 aa		32.69	■■■□□ 2.82
SRRM2-222	ENST00000575009	TTLL5	Q6EMB2	1281 aa		32.69	■■■□□ 2.82
SRRM2-222	ENST00000575009	PA2G4	Q9UQ80	394 aa	Known RBP	32.69	■■■□□ 2.82
SRRM2-222	ENST00000575009	HDAC5	Q9UQL6	1122 aa		32.69	■■■□□ 2.82
SRRM2-222	ENST00000575009	TRAF5	O00463	557 aa		32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	ATG9A	Q7Z3C6	839 aa		32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	FTSJ3	Q8IY81	847 aa	Known RBP	32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	DZIP1L	Q8IYY4	767 aa	Known RBP	32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	PGAP2	Q9UHJ9	254 aa		32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	POLR2A	P24928	1970 aa	Known RBP	32.68	■■■□□ 2.82
SRRM2-222	ENST00000575009	ZNF280A	P59817	542 aa	Predicted RBP	32.67	■■■□□ 2.82
SRRM2-222	ENST00000575009	KIF4B	Q2VIQ3	1234 aa		32.67	■■■□□ 2.82
SRRM2-222	ENST00000575009	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.67	■■■□□ 2.82
SRRM2-222	ENST00000575009	JAG2	Q9Y219	1238 aa		32.67	■■■□□ 2.82
SRRM2-222	ENST00000575009	PDE8B	O95263	885 aa		32.66	■■■□□ 2.82
SRRM2-222	ENST00000575009	USP17L8	P0C7I0	530 aa		32.66	■■■□□ 2.82
SRRM2-222	ENST00000575009	IL1R1	P14778	569 aa		32.66	■■■□□ 2.82
SRRM2-222	ENST00000575009	TRPM7	Q96QT4	1865 aa		32.65	■■■□□ 2.82
SRRM2-222	ENST00000575009	FAM84B	Q96KN1	310 aa	Predicted RBP	32.65	■■■□□ 2.82
SRRM2-222	ENST00000575009	ASTN2	O75129	1339 aa	Predicted RBP	32.65	■■■□□ 2.82
SRRM2-222	ENST00000575009	GNAI2	P04899	355 aa		32.64	■■■□□ 2.82
SRRM2-222	ENST00000575009	ITPRIP	Q8IWB1	547 aa		32.64	■■■□□ 2.82
SRRM2-222	ENST00000575009	ZC3H15	Q8WU90	426 aa	Known RBP	32.64	■■■□□ 2.82
SRRM2-222	ENST00000575009	SRGAP3	O43295	1099 aa		32.63	■■■□□ 2.81
SRRM2-222	ENST00000575009	CERS5	Q8N5B7	392 aa		32.63	■■■□□ 2.81
SRRM2-222	ENST00000575009	PANK1	Q8TE04	598 aa		32.63	■■■□□ 2.81
SRRM2-222	ENST00000575009	CREBZF	Q9NS37	354 aa		32.63	■■■□□ 2.81
SRRM2-222	ENST00000575009	MYO3B	Q8WXR4	1341 aa		32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	HIBADH	P31937	336 aa	Known RBP	32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	MTX1	Q13505	466 aa		32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	DLK2	Q6UY11	383 aa		32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	MYOZ2	Q9NPC6	264 aa		32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	RCAN3	Q9UKA8	241 aa		32.62	■■■□□ 2.81
SRRM2-222	ENST00000575009	KIAA0825	Q8IV33	1275 aa		32.61	■■■□□ 2.81
SRRM2-222	ENST00000575009	KLRG1	Q96E93	195 aa		32.61	■■■□□ 2.81
SRRM2-222	ENST00000575009	COPRS	Q9NQ92	184 aa		32.61	■■■□□ 2.81
SRRM2-222	ENST00000575009	TMEM88B	A6NKF7	163 aa		32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	CIAO1	O76071	339 aa		32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	FGFR2	P21802	821 aa		32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	TDRD7	Q8NHU6	1098 aa	Known RBP	32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	C1orf115	Q9H7X2	142 aa		32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.6	■■■□□ 2.81
SRRM2-222	ENST00000575009	PNMA6E	A0A0J9YXQ4	647 aa		32.59	■■■□□ 2.81
SRRM2-222	ENST00000575009	PUM3	Q15397	648 aa	Known RBP	32.59	■■■□□ 2.81
SRRM2-222	ENST00000575009	USP48	Q86UV5	1035 aa		32.59	■■■□□ 2.81
SRRM2-222	ENST00000575009	GGA3	Q9NZ52	723 aa		32.59	■■■□□ 2.81
SRRM2-222	ENST00000575009	SCARF1	Q14162	830 aa		32.58	■■■□□ 2.81
SRRM2-222	ENST00000575009	FBXO33	Q7Z6M2	555 aa		32.58	■■■□□ 2.81
SRRM2-222	ENST00000575009	FBXO3	Q9UK99	471 aa		32.58	■■■□□ 2.81
SRRM2-222	ENST00000575009	CDC37L1	Q7L3B6	337 aa		32.57	■■■□□ 2.8
SRRM2-222	ENST00000575009	MKRN1	Q9UHC7	482 aa	Known RBP	32.57	■■■□□ 2.8
SRRM2-222	ENST00000575009	ADM5	C9JUS6	153 aa		32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009	ZBTB7B	O15156	539 aa	Predicted RBP	32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009	SASH1	O94885	1247 aa		32.56	■■■□□ 2.8
SRRM2-222	ENST00000575009	BCAM	P50895	628 aa		32.56	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms