RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ZNF280AP59817 542 aaPredicted RBP24.87■■□□□ 1.57
SCARF1-208ENST00000574545 TBC1D10BQ4KMP7 808 aaPredicted RBP24.87■■□□□ 1.57
SCARF1-208ENST00000574545 USP17L1Q7RTZ2 530 aa24.87■■□□□ 1.57
SCARF1-208ENST00000574545 GLIS2Q9BZE0 524 aaPredicted RBP24.87■■□□□ 1.57
SCARF1-208ENST00000574545 USP44Q9H0E7 712 aa24.87■■□□□ 1.57
SCARF1-208ENST00000574545 TAF5LO75529 589 aa24.86■■□□□ 1.57
SCARF1-208ENST00000574545 C15orf52Q6ZUT6 534 aaKnown RBP24.86■■□□□ 1.57
SCARF1-208ENST00000574545 DACT2Q5SW24 774 aa24.85■■□□□ 1.57
SCARF1-208ENST00000574545 CDC37L1Q7L3B6 337 aa24.85■■□□□ 1.57
SCARF1-208ENST00000574545 ANKRD44Q8N8A2 993 aa24.85■■□□□ 1.57
SCARF1-208ENST00000574545 HELBQ8NG08 1087 aaPredicted RBP24.85■■□□□ 1.57
SCARF1-208ENST00000574545 BICC1Q9H694 974 aaKnown RBP24.85■■□□□ 1.57
SCARF1-208ENST00000574545 ZNF646O15015 1829 aaPredicted RBP24.84■■□□□ 1.57
SCARF1-208ENST00000574545 RARSP54136 660 aaKnown RBP24.84■■□□□ 1.57
SCARF1-208ENST00000574545 LDHAL6AQ6ZMR3 332 aa24.84■■□□□ 1.57
SCARF1-208ENST00000574545 NOB1Q9ULX3 412 aaKnown RBP24.84■■□□□ 1.57
SCARF1-208ENST00000574545 TRPM7Q96QT4 1865 aa24.83■■□□□ 1.57
SCARF1-208ENST00000574545 VEGFBP49765 207 aa24.83■■□□□ 1.57
SCARF1-208ENST00000574545 RBM26Q5T8P6 1007 aaKnown RBP24.83■■□□□ 1.57
SCARF1-208ENST00000574545 STRIP1Q5VSL9 837 aa24.83■■□□□ 1.57
SCARF1-208ENST00000574545 A0A1B0GUL6 1792 aa24.82■■□□□ 1.56
SCARF1-208ENST00000574545 KIF4BQ2VIQ3 1234 aa24.82■■□□□ 1.56
SCARF1-208ENST00000574545 DEFB115Q30KQ5 88 aa24.82■■□□□ 1.56
SCARF1-208ENST00000574545 USP17L8P0C7I0 530 aa24.81■■□□□ 1.56
SCARF1-208ENST00000574545 USP48Q86UV5 1035 aa24.81■■□□□ 1.56
SCARF1-208ENST00000574545 MXD3Q9BW11 206 aa24.81■■□□□ 1.56
SCARF1-208ENST00000574545 PUS3Q9BZE2 481 aaKnown RBP24.81■■□□□ 1.56
SCARF1-208ENST00000574545 CD209Q9NNX6 404 aa24.81■■□□□ 1.56
SCARF1-208ENST00000574545 RIPOR2Q9Y4F9 1068 aa24.81■■□□□ 1.56
SCARF1-208ENST00000574545 POLR2AP24928 1970 aaKnown RBP24.81■■□□□ 1.56
SCARF1-208ENST00000574545 KCNJ4P48050 445 aa24.8■■□□□ 1.56
SCARF1-208ENST00000574545 TAF7LQ5H9L4 462 aa24.8■■□□□ 1.56
SCARF1-208ENST00000574545 DLK2Q6UY11 383 aa24.8■■□□□ 1.56
SCARF1-208ENST00000574545 CNNM1Q9NRU3 951 aa24.8■■□□□ 1.56
SCARF1-208ENST00000574545 TLL2Q9Y6L7 1015 aa24.8■■□□□ 1.56
SCARF1-208ENST00000574545 CELF2O95319 508 aaKnown RBP24.79■■□□□ 1.56
SCARF1-208ENST00000574545 TTLL5Q6EMB2 1281 aa24.79■■□□□ 1.56
SCARF1-208ENST00000574545 ABT1Q9ULW3 272 aaKnown RBP24.79■■□□□ 1.56
SCARF1-208ENST00000574545 ASTN2O75129 1339 aaPredicted RBP24.79■■□□□ 1.56
SCARF1-208ENST00000574545 HSPA1AP0DMV8 641 aaKnown RBP24.78■■□□□ 1.56
SCARF1-208ENST00000574545 HSPA1BP0DMV9 641 aaKnown RBP24.78■■□□□ 1.56
SCARF1-208ENST00000574545 MYOZ2Q9NPC6 264 aa24.78■■□□□ 1.56
SCARF1-208ENST00000574545 MYO3BQ8WXR4 1341 aa24.78■■□□□ 1.56
SCARF1-208ENST00000574545 IL1R1P14778 569 aa24.77■■□□□ 1.56
SCARF1-208ENST00000574545 SCARF1Q14162 830 aa24.77■■□□□ 1.56
SCARF1-208ENST00000574545 SAPCD2Q86UD0 394 aa24.77■■□□□ 1.56
SCARF1-208ENST00000574545 ARHGAP45Q92619 1136 aa24.77■■□□□ 1.56
SCARF1-208ENST00000574545 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
SCARF1-208ENST00000574545 PLIN1O60240 522 aa24.76■■□□□ 1.55
SCARF1-208ENST00000574545 GTF2IP78347 998 aa24.76■■□□□ 1.55
SCARF1-208ENST00000574545 UBE4AQ14139 1066 aa24.76■■□□□ 1.55
SCARF1-208ENST00000574545 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
SCARF1-208ENST00000574545 DCPSQ96C86 337 aaKnown RBP24.76■■□□□ 1.55
SCARF1-208ENST00000574545 LRRC24Q50LG9 513 aa24.75■■□□□ 1.55
SCARF1-208ENST00000574545 GGA3Q9NZ52 723 aa24.75■■□□□ 1.55
SCARF1-208ENST00000574545 WDR33Q9C0J8 1336 aaKnown RBP24.75■■□□□ 1.55
SCARF1-208ENST00000574545 ADM5C9JUS6 153 aa24.74■■□□□ 1.55
SCARF1-208ENST00000574545 RFX5P48382 616 aaPredicted RBP24.74■■□□□ 1.55
SCARF1-208ENST00000574545 MMP14P50281 582 aa24.74■■□□□ 1.55
SCARF1-208ENST00000574545 MROH5Q6ZUA9 1318 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 HNRNPUQ00839 825 aaKnown RBP eCLIP24.73■■□□□ 1.55
SCARF1-208ENST00000574545 ZNF804AQ7Z570 1209 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 VGLL2Q8N8G2 317 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 KLHDC4Q8TBB5 520 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 FBXW7Q969H0 707 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 HHIPL1Q96JK4 782 aa24.73■■□□□ 1.55
SCARF1-208ENST00000574545 NBPF9Q3BBW0 867 aa24.72■■□□□ 1.55
SCARF1-208ENST00000574545 ANGEL2Q5VTE6 544 aaKnown RBP24.72■■□□□ 1.55
SCARF1-208ENST00000574545 CERS5Q8N5B7 392 aa24.72■■□□□ 1.55
SCARF1-208ENST00000574545 FAM84BQ96KN1 310 aaPredicted RBP24.72■■□□□ 1.55
SCARF1-208ENST00000574545 ZNF408Q9H9D4 720 aa24.72■■□□□ 1.55
SCARF1-208ENST00000574545 KIF16BQ96L93 1317 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 PITPNM2Q9BZ72 1349 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 WNT10BO00744 389 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 INTS3Q68E01 1043 aaKnown RBP24.71■■□□□ 1.55
SCARF1-208ENST00000574545 CYP4F22Q6NT55 531 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 OGFOD1Q8N543 542 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 ZBED3Q96IU2 234 aaPredicted RBP24.71■■□□□ 1.55
SCARF1-208ENST00000574545 CAPNS2Q96L46 248 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 WBP1LQ9NX94 342 aa24.71■■□□□ 1.55
SCARF1-208ENST00000574545 BCAR3O75815 825 aa24.7■■□□□ 1.54
SCARF1-208ENST00000574545 PTPN12Q05209 780 aaKnown RBP24.7■■□□□ 1.54
SCARF1-208ENST00000574545 KIAA0825Q8IV33 1275 aa24.7■■□□□ 1.54
SCARF1-208ENST00000574545 SULF1Q8IWU6 871 aa24.7■■□□□ 1.54
SCARF1-208ENST00000574545 TDRD7Q8NHU6 1098 aaKnown RBP24.7■■□□□ 1.54
SCARF1-208ENST00000574545 SASH1O94885 1247 aa24.69■■□□□ 1.54
SCARF1-208ENST00000574545 UBTFL1P0CB47 393 aaPredicted RBP24.69■■□□□ 1.54
SCARF1-208ENST00000574545 FKBP1AP62942 108 aaKnown RBP24.69■■□□□ 1.54
SCARF1-208ENST00000574545 FAM205AQ6ZU69 1335 aa24.68■■□□□ 1.54
SCARF1-208ENST00000574545 PDE8BO95263 885 aa24.68■■□□□ 1.54
SCARF1-208ENST00000574545 ECE1P42892 770 aa24.68■■□□□ 1.54
SCARF1-208ENST00000574545 GYG1P46976 350 aa24.68■■□□□ 1.54
SCARF1-208ENST00000574545 COL13A1Q5TAT6 717 aaPredicted RBP24.68■■□□□ 1.54
SCARF1-208ENST00000574545 FBXO33Q7Z6M2 555 aa24.68■■□□□ 1.54
SCARF1-208ENST00000574545 HIBADHP31937 336 aaKnown RBP24.67■■□□□ 1.54
SCARF1-208ENST00000574545 METTL24Q5JXM2 366 aa24.67■■□□□ 1.54
SCARF1-208ENST00000574545 CDCA5Q96FF9 252 aa24.67■■□□□ 1.54
SCARF1-208ENST00000574545 MEIS3Q99687 375 aa24.67■■□□□ 1.54
SCARF1-208ENST00000574545 TNNQ9UQP3 1299 aa24.67■■□□□ 1.54
SCARF1-208ENST00000574545 THSD7BQ9C0I4 1608 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms