RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 ANKRD44Q8N8A2 993 aa24.51■■□□□ 1.51
SPNS2-207ENST00000573990 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.51■■□□□ 1.51
SPNS2-207ENST00000573990 FRAT1Q92837 279 aaPredicted RBP24.51■■□□□ 1.51
SPNS2-207ENST00000573990 PLIN1O60240 522 aa24.5■■□□□ 1.51
SPNS2-207ENST00000573990 RPS12P25398 132 aaKnown RBP24.5■■□□□ 1.51
SPNS2-207ENST00000573990 LDHAL6AQ6ZMR3 332 aa24.5■■□□□ 1.51
SPNS2-207ENST00000573990 PODNQ7Z5L7 613 aa24.5■■□□□ 1.51
SPNS2-207ENST00000573990 PUS3Q9BZE2 481 aaKnown RBP24.5■■□□□ 1.51
SPNS2-207ENST00000573990 TMEM88BA6NKF7 163 aa24.49■■□□□ 1.51
SPNS2-207ENST00000573990 KCNJ4P48050 445 aa24.49■■□□□ 1.51
SPNS2-207ENST00000573990 RSBN1LQ6PCB5 846 aaPredicted RBP24.49■■□□□ 1.51
SPNS2-207ENST00000573990 MXD3Q9BW11 206 aa24.49■■□□□ 1.51
SPNS2-207ENST00000573990 CNNM1Q9NRU3 951 aa24.49■■□□□ 1.51
SPNS2-207ENST00000573990 MKRN1Q9UHC7 482 aaKnown RBP24.49■■□□□ 1.51
SPNS2-207ENST00000573990 PGAP2Q9UHJ9 254 aa24.49■■□□□ 1.51
SPNS2-207ENST00000573990 USP17L3A6NCW0 530 aa24.48■■□□□ 1.51
SPNS2-207ENST00000573990 USP17L4A6NCW7 530 aa24.48■■□□□ 1.51
SPNS2-207ENST00000573990 USP17L1Q7RTZ2 530 aa24.48■■□□□ 1.51
SPNS2-207ENST00000573990 GLIS2Q9BZE0 524 aaPredicted RBP24.48■■□□□ 1.51
SPNS2-207ENST00000573990 COA1Q9GZY4 146 aa24.48■■□□□ 1.51
SPNS2-207ENST00000573990 RABL6Q3YEC7 729 aaPredicted RBP24.47■■□□□ 1.51
SPNS2-207ENST00000573990 FBXW7Q969H0 707 aa24.47■■□□□ 1.51
SPNS2-207ENST00000573990 IRS2Q9Y4H2 1338 aa24.46■■□□□ 1.51
SPNS2-207ENST00000573990 TRIM27P14373 513 aa24.46■■□□□ 1.51
SPNS2-207ENST00000573990 DLK2Q6UY11 383 aa24.46■■□□□ 1.51
SPNS2-207ENST00000573990 JMYQ8N9B5 988 aa24.46■■□□□ 1.51
SPNS2-207ENST00000573990 GMLQ99445 158 aa24.46■■□□□ 1.51
SPNS2-207ENST00000573990 A0A1B0GUL6 1792 aa24.45■■□□□ 1.5
SPNS2-207ENST00000573990 HDAC5Q9UQL6 1122 aa24.45■■□□□ 1.5
SPNS2-207ENST00000573990 DACT2Q5SW24 774 aa24.44■■□□□ 1.5
SPNS2-207ENST00000573990 INTS3Q68E01 1043 aaKnown RBP24.44■■□□□ 1.5
SPNS2-207ENST00000573990 FTSJ3Q8IY81 847 aaKnown RBP24.44■■□□□ 1.5
SPNS2-207ENST00000573990 AGBL3Q8NEM8 1001 aa24.44■■□□□ 1.5
SPNS2-207ENST00000573990 KLHDC4Q8TBB5 520 aa24.44■■□□□ 1.5
SPNS2-207ENST00000573990 ZC3H15Q8WU90 426 aaKnown RBP24.44■■□□□ 1.5
SPNS2-207ENST00000573990 TNNQ9UQP3 1299 aa24.44■■□□□ 1.5
SPNS2-207ENST00000573990 PSME4Q14997 1843 aa24.44■■□□□ 1.5
SPNS2-207ENST00000573990 ASTN2O75129 1339 aaPredicted RBP24.43■■□□□ 1.5
SPNS2-207ENST00000573990 KIF4BQ2VIQ3 1234 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 LRRC24Q50LG9 513 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 CST9Q5W186 159 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 USP48Q86UV5 1035 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 CD209Q9NNX6 404 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 RIPOR2Q9Y4F9 1068 aa24.43■■□□□ 1.5
SPNS2-207ENST00000573990 ZNF280AP59817 542 aaPredicted RBP24.42■■□□□ 1.5
SPNS2-207ENST00000573990 DZIP1LQ8IYY4 767 aaKnown RBP24.42■■□□□ 1.5
SPNS2-207ENST00000573990 USP17L8P0C7I0 530 aa24.41■■□□□ 1.5
SPNS2-207ENST00000573990 GTF2IP78347 998 aa24.41■■□□□ 1.5
SPNS2-207ENST00000573990 STRIP1Q5VSL9 837 aa24.41■■□□□ 1.5
SPNS2-207ENST00000573990 TTLL5Q6EMB2 1281 aa24.41■■□□□ 1.5
SPNS2-207ENST00000573990 C15orf52Q6ZUT6 534 aaKnown RBP24.41■■□□□ 1.5
SPNS2-207ENST00000573990 CDC37L1Q7L3B6 337 aa24.4■■□□□ 1.5
SPNS2-207ENST00000573990 ABT1Q9ULW3 272 aaKnown RBP24.4■■□□□ 1.5
SPNS2-207ENST00000573990 CNTNAP1P78357 1384 aa24.4■■□□□ 1.5
SPNS2-207ENST00000573990 ZNF646O15015 1829 aaPredicted RBP24.4■■□□□ 1.5
SPNS2-207ENST00000573990 ZNF609O15014 1411 aa24.39■■□□□ 1.5
SPNS2-207ENST00000573990 UBTFL1P0CB47 393 aaPredicted RBP24.39■■□□□ 1.49
SPNS2-207ENST00000573990 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
SPNS2-207ENST00000573990 RFX5P48382 616 aaPredicted RBP24.38■■□□□ 1.49
SPNS2-207ENST00000573990 VEGFBP49765 207 aa24.38■■□□□ 1.49
SPNS2-207ENST00000573990 SCARF1Q14162 830 aa24.38■■□□□ 1.49
SPNS2-207ENST00000573990 MEIS3Q99687 375 aa24.38■■□□□ 1.49
SPNS2-207ENST00000573990 ZNF408Q9H9D4 720 aa24.38■■□□□ 1.49
SPNS2-207ENST00000573990 MYOZ2Q9NPC6 264 aa24.38■■□□□ 1.49
SPNS2-207ENST00000573990 ADM5C9JUS6 153 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 PDE3AQ14432 1141 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 DEFB115Q30KQ5 88 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 ZNF804AQ7Z570 1209 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 CLUAP1Q96AJ1 413 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 DCPSQ96C86 337 aaKnown RBP24.37■■□□□ 1.49
SPNS2-207ENST00000573990 JAG2Q9Y219 1238 aa24.37■■□□□ 1.49
SPNS2-207ENST00000573990 LRRFIP2Q9Y608 721 aaKnown RBP24.37■■□□□ 1.49
SPNS2-207ENST00000573990 MROH5Q6ZUA9 1318 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 TRPM7Q96QT4 1865 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 POLR2AP24928 1970 aaKnown RBP24.36■■□□□ 1.49
SPNS2-207ENST00000573990 GNAI3P08754 354 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 GYG1P46976 350 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 UBE4AQ14139 1066 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 METTL24Q5JXM2 366 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 KRT26Q7Z3Y9 468 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 CHMP4BQ9H444 224 aaKnown RBP24.36■■□□□ 1.49
SPNS2-207ENST00000573990 GGA3Q9NZ52 723 aa24.36■■□□□ 1.49
SPNS2-207ENST00000573990 RASSF10A6NK89 507 aa24.35■■□□□ 1.49
SPNS2-207ENST00000573990 IL1R1P14778 569 aa24.35■■□□□ 1.49
SPNS2-207ENST00000573990 ANGEL2Q5VTE6 544 aaKnown RBP24.35■■□□□ 1.49
SPNS2-207ENST00000573990 KIAA0825Q8IV33 1275 aa24.35■■□□□ 1.49
SPNS2-207ENST00000573990 CERS5Q8N5B7 392 aa24.35■■□□□ 1.49
SPNS2-207ENST00000573990 SCAF8Q9UPN6 1271 aaKnown RBP24.35■■□□□ 1.49
SPNS2-207ENST00000573990 PTPN12Q05209 780 aaKnown RBP24.34■■□□□ 1.49
SPNS2-207ENST00000573990 FAM84BQ96KN1 310 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-207ENST00000573990 MYO3BQ8WXR4 1341 aa24.34■■□□□ 1.49
SPNS2-207ENST00000573990 NBPF9Q3BBW0 867 aa24.33■■□□□ 1.49
SPNS2-207ENST00000573990 TMEM57Q8N5G2 664 aa24.33■■□□□ 1.49
SPNS2-207ENST00000573990 VGLL2Q8N8G2 317 aa24.33■■□□□ 1.49
SPNS2-207ENST00000573990 OGFOD1Q8N543 542 aa24.32■■□□□ 1.48
SPNS2-207ENST00000573990 TLL2Q9Y6L7 1015 aa24.32■■□□□ 1.48
SPNS2-207ENST00000573990 EYA2O00167 538 aa24.31■■□□□ 1.48
SPNS2-207ENST00000573990 PDE8BO95263 885 aa24.31■■□□□ 1.48
SPNS2-207ENST00000573990 HIBADHP31937 336 aaKnown RBP24.31■■□□□ 1.48
SPNS2-207ENST00000573990 PAXIP1Q6ZW49 1069 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms