RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
CACNA1A-203ENST00000573891 XAGE3Q8WTP9 111 aa7.89□□□□□ -1.15
CACNA1A-203ENST00000573891 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
CACNA1A-203ENST00000573891 TRPM7Q96QT4 1865 aa7.89□□□□□ -1.15
CACNA1A-203ENST00000573891 PDE4DIPQ5VU43 2346 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 SHTN1A0MZ66 631 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 SLC34A2O95436 690 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 RIPK4P57078 832 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 CDC37L1Q7L3B6 337 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 TMC4Q7Z404 712 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 TRMT112Q9UI30 125 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-203ENST00000573891 LRRC37AA6NMS7 1700 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 CHL1O00533 1208 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 TMPOP42166 694 aaKnown RBP7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 CLCN6P51797 869 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 MAP3K9P80192 1104 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 LMOD3Q0VAK6 560 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 DPF2Q92785 391 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 CHMP4AQ9BY43 222 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 LAMB2P55268 1798 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 ANKRD36CQ5JPF3 1778 aa7.87□□□□□ -1.15
CACNA1A-203ENST00000573891 C2orf72A6NCS6 295 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 CCDC85CA6NKD9 419 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 H7C1D1 291 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 MLLT1Q03111 559 aaPredicted RBP7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 NOGQ13253 232 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 KRT24Q2M2I5 525 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 PLBD2Q8NHP8 589 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 CELF1Q92879 486 aaKnown RBP7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 TMEM121BQ9BXQ6 578 aaPredicted RBP7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 MCOLN1Q9GZU1 580 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 CHPF2Q9P2E5 772 aa7.86□□□□□ -1.15
CACNA1A-203ENST00000573891 PSMD14O00487 310 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 TRAK2O60296 914 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 EGFRP00533 1210 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 HOXB7P09629 217 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 MS4A1P11836 297 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 HUNKP57058 714 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 SF3B3Q15393 1217 aaKnown RBP7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 WASHC4Q2M389 1173 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 TBC1D10BQ4KMP7 808 aaPredicted RBP7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 SAMD7Q7Z3H4 446 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 KRT26Q7Z3Y9 468 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 USP48Q86UV5 1035 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 ZIC5Q96T25 663 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 ISCA1Q9BUE6 129 aa7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 BMP2KQ9NSY1 1161 aaPredicted RBP7.85□□□□□ -1.15
CACNA1A-203ENST00000573891 RTL9Q8NET4 1388 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 COL4A1P02462 1669 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 GPSM2P81274 684 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 TRIM28Q13263 835 aaKnown RBP7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 TTLL12Q14166 644 aaPredicted RBP7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 RALBP1Q15311 655 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 DLK2Q6UY11 383 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 ANKRD13DQ6ZTN6 518 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 PDCD7Q8N8D1 485 aaKnown RBP7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 FAM89AQ96GI7 184 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 DBNDD1Q9H9R9 158 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 POLLQ9UGP5 575 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 NSFL1CQ9UNZ2 370 aaKnown RBP7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 TRIM35Q9UPQ4 493 aa7.84□□□□□ -1.15
CACNA1A-203ENST00000573891 DDX60Q8IY21 1712 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 ADM5C9JUS6 153 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 ATP5J2-PTCD1G3V325 749 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 C6orf229H3BNL8 230 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 ECE2O60344 883 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 DGKZQ13574 1117 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 RGMBQ6NW40 437 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 TBC1D16Q8TBP0 767 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 EYA3Q99504 573 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 REPIN1Q9BWE0 567 aaKnown RBP7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 GBA2Q9HCG7 927 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 KCNQ5Q9NR82 932 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 SAGE1Q9NXZ1 904 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 DBF4Q9UBU7 674 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 ZNF609O15014 1411 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 TAF1P21675 1872 aa7.83□□□□□ -1.16
CACNA1A-203ENST00000573891 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 VIL1P09327 827 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 RPS8P62241 208 aaKnown RBP7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 PTGDRQ13258 359 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 DOK7Q18PE1 504 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 CCDC146Q8IYE0 955 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 CCDC82Q8N4S0 544 aa7.82□□□□□ -1.16
CACNA1A-203ENST00000573891 C2orf69Q8N8R5 385 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms