RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TLL2Q9Y6L7 1015 aa21.94■■□□□ 1.1
SMG6-212ENST00000573153 USP17L3A6NCW0 530 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 USP17L4A6NCW7 530 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 POLR2AP24928 1970 aaKnown RBP21.93■■□□□ 1.1
SMG6-212ENST00000573153 IFIT5Q13325 482 aaKnown RBP21.93■■□□□ 1.1
SMG6-212ENST00000573153 KIF4BQ2VIQ3 1234 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 USP17L1Q7RTZ2 530 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 ANKRD2Q9GZV1 360 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 COA1Q9GZY4 146 aa21.93■■□□□ 1.1
SMG6-212ENST00000573153 TAF5LO75529 589 aa21.92■■□□□ 1.1
SMG6-212ENST00000573153 BRPF1P55201 1214 aaPredicted RBP21.92■■□□□ 1.1
SMG6-212ENST00000573153 DEFB115Q30KQ5 88 aa21.92■■□□□ 1.1
SMG6-212ENST00000573153 CDC37L1Q7L3B6 337 aa21.92■■□□□ 1.1
SMG6-212ENST00000573153 HELBQ8NG08 1087 aaPredicted RBP21.92■■□□□ 1.1
SMG6-212ENST00000573153 MPHOSPH8Q99549 860 aa21.92■■□□□ 1.1
SMG6-212ENST00000573153 USP44Q9H0E7 712 aa21.92■■□□□ 1.1
SMG6-212ENST00000573153 C9orf78Q9NZ63 289 aaPredicted RBP21.92■■□□□ 1.1
SMG6-212ENST00000573153 COL13A1Q5TAT6 717 aaPredicted RBP21.91■■□□□ 1.1
SMG6-212ENST00000573153 SAPCD2Q86UD0 394 aa21.91■■□□□ 1.1
SMG6-212ENST00000573153 ADM5C9JUS6 153 aa21.9■■□□□ 1.1
SMG6-212ENST00000573153 CELF2O95319 508 aaKnown RBP21.9■■□□□ 1.1
SMG6-212ENST00000573153 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
SMG6-212ENST00000573153 STRIP1Q5VSL9 837 aa21.9■■□□□ 1.1
SMG6-212ENST00000573153 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
SMG6-212ENST00000573153 MIER1Q8N108 512 aa21.9■■□□□ 1.1
SMG6-212ENST00000573153 PUS3Q9BZE2 481 aaKnown RBP21.9■■□□□ 1.1
SMG6-212ENST00000573153 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
SMG6-212ENST00000573153 WDR33Q9C0J8 1336 aaKnown RBP21.89■■□□□ 1.1
SMG6-212ENST00000573153 RBM26Q5T8P6 1007 aaKnown RBP21.89■■□□□ 1.09
SMG6-212ENST00000573153 USP48Q86UV5 1035 aa21.89■■□□□ 1.09
SMG6-212ENST00000573153 CD209Q9NNX6 404 aa21.89■■□□□ 1.09
SMG6-212ENST00000573153 GGA3Q9NZ52 723 aa21.89■■□□□ 1.09
SMG6-212ENST00000573153 ABT1Q9ULW3 272 aaKnown RBP21.89■■□□□ 1.09
SMG6-212ENST00000573153 CHMP3Q9Y3E7 222 aa21.89■■□□□ 1.09
SMG6-212ENST00000573153 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
SMG6-212ENST00000573153 CERS5Q8N5B7 392 aa21.88■■□□□ 1.09
SMG6-212ENST00000573153 WBP1LQ9NX94 342 aa21.88■■□□□ 1.09
SMG6-212ENST00000573153 G3V3G9 751 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 FOXN1O15353 648 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 USP17L8P0C7I0 530 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 CCDC57Q2TAC2 916 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 DCAF8Q5TAQ9 597 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 CYP4F22Q6NT55 531 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 ZBED3Q96IU2 234 aaPredicted RBP21.87■■□□□ 1.09
SMG6-212ENST00000573153 MYOZ2Q9NPC6 264 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 SMC4Q9NTJ3 1288 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 RIPOR2Q9Y4F9 1068 aa21.87■■□□□ 1.09
SMG6-212ENST00000573153 RFX5P48382 616 aaPredicted RBP21.86■■□□□ 1.09
SMG6-212ENST00000573153 LDHAL6AQ6ZMR3 332 aa21.86■■□□□ 1.09
SMG6-212ENST00000573153 KRT26Q7Z3Y9 468 aa21.86■■□□□ 1.09
SMG6-212ENST00000573153 CAPNS2Q96L46 248 aa21.86■■□□□ 1.09
SMG6-212ENST00000573153 IL1R1P14778 569 aa21.85■■□□□ 1.09
SMG6-212ENST00000573153 RARSP54136 660 aaKnown RBP21.85■■□□□ 1.09
SMG6-212ENST00000573153 SCARF1Q14162 830 aa21.85■■□□□ 1.09
SMG6-212ENST00000573153 VGLL2Q8N8G2 317 aa21.85■■□□□ 1.09
SMG6-212ENST00000573153 HHIPL1Q96JK4 782 aa21.85■■□□□ 1.09
SMG6-212ENST00000573153 ANGEL2Q5VTE6 544 aaKnown RBP21.84■■□□□ 1.09
SMG6-212ENST00000573153 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
SMG6-212ENST00000573153 MYO3BQ8WXR4 1341 aa21.83■■□□□ 1.09
SMG6-212ENST00000573153 GTF2IP78347 998 aa21.83■■□□□ 1.09
SMG6-212ENST00000573153 NBPF9Q3BBW0 867 aa21.83■■□□□ 1.09
SMG6-212ENST00000573153 LRRC24Q50LG9 513 aa21.83■■□□□ 1.09
SMG6-212ENST00000573153 TTLL5Q6EMB2 1281 aa21.83■■□□□ 1.09
SMG6-212ENST00000573153 PITPNM2Q9BZ72 1349 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 WNT10BO00744 389 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 KLHDC4Q8TBB5 520 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 ZNF408Q9H9D4 720 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 CNNM1Q9NRU3 951 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 ARAP2Q8WZ64 1704 aa21.82■■□□□ 1.08
SMG6-212ENST00000573153 AOC2O75106 756 aa21.81■■□□□ 1.08
SMG6-212ENST00000573153 KCNJ4P48050 445 aa21.81■■□□□ 1.08
SMG6-212ENST00000573153 DCPSQ96C86 337 aaKnown RBP21.81■■□□□ 1.08
SMG6-212ENST00000573153 CDCA5Q96FF9 252 aa21.81■■□□□ 1.08
SMG6-212ENST00000573153 SCAF8Q9UPN6 1271 aaKnown RBP21.81■■□□□ 1.08
SMG6-212ENST00000573153 FAM155AB1AL88 458 aaPredicted RBP21.8■■□□□ 1.08
SMG6-212ENST00000573153 UBE4AQ14139 1066 aa21.8■■□□□ 1.08
SMG6-212ENST00000573153 FAM84BQ96KN1 310 aaPredicted RBP21.8■■□□□ 1.08
SMG6-212ENST00000573153 ZIC5Q96T25 663 aa21.8■■□□□ 1.08
SMG6-212ENST00000573153 PCDHAC2Q9Y5I4 1007 aa21.8■■□□□ 1.08
SMG6-212ENST00000573153 AOX1Q06278 1338 aa21.8■■□□□ 1.08
SMG6-212ENST00000573153 KIAA0825Q8IV33 1275 aa21.79■■□□□ 1.08
SMG6-212ENST00000573153 TDRD7Q8NHU6 1098 aaKnown RBP21.79■■□□□ 1.08
SMG6-212ENST00000573153 GBA2Q9HCG7 927 aaPredicted RBP21.79■■□□□ 1.08
SMG6-212ENST00000573153 TNNQ9UQP3 1299 aa21.79■■□□□ 1.08
SMG6-212ENST00000573153 FAM205AQ6ZU69 1335 aa21.79■■□□□ 1.08
SMG6-212ENST00000573153 PLIN1O60240 522 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 ECE1P42892 770 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 FKBP1AP62942 108 aaKnown RBP21.78■■□□□ 1.08
SMG6-212ENST00000573153 PTPN12Q05209 780 aaKnown RBP21.78■■□□□ 1.08
SMG6-212ENST00000573153 TAF7LQ5H9L4 462 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 SULF1Q8IWU6 871 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 FBXW7Q969H0 707 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 PAPPA2Q9BXP8 1791 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 MROH5Q6ZUA9 1318 aa21.78■■□□□ 1.08
SMG6-212ENST00000573153 SASH1O94885 1247 aa21.77■■□□□ 1.08
SMG6-212ENST00000573153 HSPA8P11142 646 aaKnown RBP21.77■■□□□ 1.08
SMG6-212ENST00000573153 GYG1P46976 350 aa21.77■■□□□ 1.08
SMG6-212ENST00000573153 ZNF804AQ7Z570 1209 aa21.77■■□□□ 1.08
SMG6-212ENST00000573153 ECM29Q5VYK3 1845 aa21.76■■□□□ 1.07
SMG6-212ENST00000573153 FGFR2P21802 821 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms