RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 GPHNQ9NQX3 736 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-212ENST00000573126 WASHC4Q2M389 1173 aa13.21□□□□□ -0.29
RPAIN-212ENST00000573126 PI16Q6UXB8 463 aa13.21□□□□□ -0.29
RPAIN-212ENST00000573126 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
RPAIN-212ENST00000573126 CFAP45Q9UL16 551 aa13.21□□□□□ -0.29
RPAIN-212ENST00000573126 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.3
RPAIN-212ENST00000573126 KCPQ6ZWJ8 1503 aa13.21□□□□□ -0.3
RPAIN-212ENST00000573126 KDM4FA0A1W2PPD8 638 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 CIAO1O76071 339 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 SCARF1Q14162 830 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
RPAIN-212ENST00000573126 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 COL5A2P05997 1499 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-212ENST00000573126 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
RPAIN-212ENST00000573126 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 PYCARDQ9ULZ3 195 aa13.2□□□□□ -0.3
RPAIN-212ENST00000573126 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
RPAIN-212ENST00000573126 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-212ENST00000573126 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
RPAIN-212ENST00000573126 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 ZNF165P49910 485 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
RPAIN-212ENST00000573126 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 FOXP2O15409 715 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 EVA1CP58658 441 aa13.19□□□□□ -0.3
RPAIN-212ENST00000573126 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-212ENST00000573126 TJP1Q07157 1748 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 PTGS1P23219 599 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 ZAP70P43403 619 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
RPAIN-212ENST00000573126 GPTP24298 496 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 KIAA1524Q8TCG1 905 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
RPAIN-212ENST00000573126 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 A0A087WWV3 80 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 IFIT5Q13325 482 aaKnown RBP13.17□□□□□ -0.3
RPAIN-212ENST00000573126 OTUD7BQ6GQQ9 843 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 CCAR1Q8IX12 1150 aaKnown RBP13.17□□□□□ -0.3
RPAIN-212ENST00000573126 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
RPAIN-212ENST00000573126 GOLPH3LQ9H4A5 285 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 SPTLC3Q9NUV7 552 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 FGAP02671 866 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 TSC1Q92574 1164 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
RPAIN-212ENST00000573126 CARMIL3Q8ND23 1372 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
RPAIN-212ENST00000573126 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-212ENST00000573126 ZNF274Q96GC6 653 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-212ENST00000573126 ARID3AQ99856 593 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 ME1P48163 572 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
RPAIN-212ENST00000573126 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 PIGBQ92521 554 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-212ENST00000573126 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
RPAIN-212ENST00000573126 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 LRMPQ12912 555 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 HLFQ16534 295 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
RPAIN-212ENST00000573126 SOS2Q07890 1332 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-212ENST00000573126 GPAA1O43292 621 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 PRC1O43663 620 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
RPAIN-212ENST00000573126 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
RPAIN-212ENST00000573126 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 GREM2Q9H772 168 aa13.14□□□□□ -0.31
RPAIN-212ENST00000573126 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms