RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 CAMSAP2Q08AD1 1489 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 BIRC3Q13489 604 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 TRPC3Q13507 836 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
USP6-204ENST00000572949 KCNA4P22459 653 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 ASIC1P78348 528 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 RSPH3Q86UC2 560 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 NME9Q86XW9 330 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 N4BP3O15049 544 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 STRN3Q13033 797 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 ANO3Q9BYT9 981 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 BMP15O95972 392 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 AFMP43652 599 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 CNBD1Q8NA66 436 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 CSADQ9Y600 493 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 PTPDC1A2A3K4 754 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.7
USP6-204ENST00000572949 EPSTI1Q96J88 318 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 FRMD4BQ9Y2L6 1034 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 ATP6V0A2Q9Y487 856 aa10.71□□□□□ -0.7
USP6-204ENST00000572949 NCOA2Q15596 1464 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 PDE6BP35913 854 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 DNM2P50570 870 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 AZI2Q9H6S1 392 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 DYNC1I1O14576 645 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 STK10O94804 968 aaKnown RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 KRT79Q5XKE5 535 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 NIM1KQ8IY84 436 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 NAP1L3Q99457 506 aaPredicted RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 CCDC87Q9NVE4 849 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 SYCE3A1L190 88 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 HSF2BPO75031 334 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 ABL1P00519 1130 aa10.7□□□□□ -0.7
USP6-204ENST00000572949 ZFYP08048 801 aaPredicted RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 FAM193BQ96PV7 902 aaPredicted RBP10.7□□□□□ -0.7
USP6-204ENST00000572949 CCDC160A6NGH7 325 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 CCDC169A6NNP5 214 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 CALML3P27482 149 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
USP6-204ENST00000572949 LMBR1Q8WVP7 490 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 NEK1Q96PY6 1258 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 MYCLP12524 364 aaPredicted RBP10.69□□□□□ -0.7
USP6-204ENST00000572949 KRT9P35527 623 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 PLCB4Q15147 1175 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 LIMCH1Q9UPQ0 1083 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
USP6-204ENST00000572949 NOL3O60936 208 aaKnown RBP10.69□□□□□ -0.7
USP6-204ENST00000572949 INF2Q27J81 1249 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 ARHGAP27Q6ZUM4 889 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 HECW1Q76N89 1606 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 TTC36A6NLP5 189 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 IL2RBP14784 551 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 GNA11P29992 359 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 ZYXQ15942 572 aaKnown RBP10.69□□□□□ -0.7
USP6-204ENST00000572949 TMC6Q7Z403 805 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 TRIM7Q9C029 511 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 PPP1R21Q6ZMI0 780 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 AKNAQ7Z591 1439 aa10.69□□□□□ -0.7
USP6-204ENST00000572949 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 PSMA7O14818 248 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 SPDYE2Q495Y8 402 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 ECHDC1Q9NTX5 307 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 PTPRCP08575 1304 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 FLIIQ13045 1269 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 STX1AQ16623 288 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 JAKMIP2Q96AA8 810 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 NSRP1Q9H0G5 558 aaKnown RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 FAM204AQ9H8W3 233 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 PLEKHH1Q9ULM0 1364 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 CYLC1P35663 651 aaPredicted RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 RNF169Q8NCN4 708 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 TTC6Q86TZ1 520 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 STMN4Q9H169 189 aaPredicted RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 TTLL3Q9Y4R7 772 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP6-204ENST00000572949 ZBED4O75132 1171 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 APBA3O96018 575 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 ZNF569Q5MCW4 686 aa10.68□□□□□ -0.7
USP6-204ENST00000572949 FAM107BQ9H098 131 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms