RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 IL22RA1Q8N6P7 574 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 NACC1Q96RE7 527 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 ADAM19Q9H013 955 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 MUC3BQ9H195 1237 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 BIN2Q9UBW5 565 aaPredicted RBP7.43□□□□□ -1.22
NUP88-202ENST00000570937 DCTN4Q9UJW0 460 aa7.43□□□□□ -1.22
NUP88-202ENST00000570937 GPR182O15218 404 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 APBA3O96018 575 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 PROCP04070 461 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 GRIK4Q16099 956 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 ADAMTSL4Q6UY14 1074 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
NUP88-202ENST00000570937 TMEM102Q8N9M5 508 aaPredicted RBP7.42□□□□□ -1.22
NUP88-202ENST00000570937 POP1Q99575 1024 aaKnown RBP7.42□□□□□ -1.22
NUP88-202ENST00000570937 DEAF1O75398 565 aaPredicted RBP7.41□□□□□ -1.22
NUP88-202ENST00000570937 ACPPP15309 386 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 SELPP16109 830 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 PTPRAP18433 802 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 CDC27P30260 824 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 GALNT12Q8IXK2 581 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 DNAJC25Q9H1X3 360 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 PPME1Q9Y570 386 aa7.41□□□□□ -1.22
NUP88-202ENST00000570937 C9orf172C9J069 976 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 PDE2AO00408 941 aaPredicted RBP7.4□□□□□ -1.22
NUP88-202ENST00000570937 PEAR1Q5VY43 1037 aaPredicted RBP7.4□□□□□ -1.22
NUP88-202ENST00000570937 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 NXPE3Q969Y0 559 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 LENG1Q96BZ8 264 aaPredicted RBP7.4□□□□□ -1.22
NUP88-202ENST00000570937 OSMRQ99650 979 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 ZKSCAN3Q9BRR0 538 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 LACRTQ9GZZ8 138 aa7.4□□□□□ -1.22
NUP88-202ENST00000570937 DLL1O00548 723 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
NUP88-202ENST00000570937 ORC1Q13415 861 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 TMC1Q8TDI8 760 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 HHIPQ96QV1 700 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 BHLHE41Q9C0J9 482 aaPredicted RBP7.39□□□□□ -1.23
NUP88-202ENST00000570937 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
NUP88-202ENST00000570937 TRPA1O75762 1119 aa7.38□□□□□ -1.23
NUP88-202ENST00000570937 MAPK1P28482 360 aa7.38□□□□□ -1.23
NUP88-202ENST00000570937 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
NUP88-202ENST00000570937 ADGRE1Q14246 886 aa7.38□□□□□ -1.23
NUP88-202ENST00000570937 IGF2-ASQ6U949 168 aa7.38□□□□□ -1.23
NUP88-202ENST00000570937 SOX13Q9UN79 622 aa7.38□□□□□ -1.23
NUP88-202ENST00000570937 EIF1AYO14602 144 aaKnown RBP7.37□□□□□ -1.23
NUP88-202ENST00000570937 TM4SF5O14894 197 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 POLR3DP05423 398 aaPredicted RBP7.37□□□□□ -1.23
NUP88-202ENST00000570937 EPHA1P21709 976 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 DSC3Q14574 896 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 KIAA0319Q5VV43 1072 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 USPL1Q5W0Q7 1092 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 SHISA2Q6UWI4 295 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 WNT8BQ93098 351 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
NUP88-202ENST00000570937 LATS2Q9NRM7 1088 aa7.37□□□□□ -1.23
NUP88-202ENST00000570937 A0A1W2PP55 124 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 LINC01387J3KSC0 135 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 TREHO43280 583 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 GATA4P43694 442 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 MBTPS1Q14703 1052 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 AEBP1Q8IUX7 1158 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 BSNDQ8WZ55 320 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 ASB16Q96NS5 453 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 CSRNP1Q96S65 589 aa7.36□□□□□ -1.23
NUP88-202ENST00000570937 H3BRJ5 948 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 CABP4P57796 275 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 XP32Q5T750 250 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 CCNJLQ8IV13 435 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 GALNT11Q8NCW6 608 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 CCDC74AQ96AQ1 378 aa7.35□□□□□ -1.23
NUP88-202ENST00000570937 FSCN2O14926 492 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 PIP4K2BP78356 416 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 ZSCAN29Q8IWY8 852 aaPredicted RBP7.34□□□□□ -1.23
NUP88-202ENST00000570937 TMEM130Q8N3G9 435 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 TCF12Q99081 682 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 NPHS2Q9NP85 383 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 OSGEPQ9NPF4 335 aa7.34□□□□□ -1.23
NUP88-202ENST00000570937 PLCB3Q01970 1234 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
NUP88-202ENST00000570937 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
NUP88-202ENST00000570937 LIN7BQ9HAP6 207 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 USP21Q9UK80 565 aa7.33□□□□□ -1.24
NUP88-202ENST00000570937 CD68P34810 354 aaPredicted RBP7.32□□□□□ -1.24
NUP88-202ENST00000570937 FMR1Q06787 632 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP88-202ENST00000570937 ENOX2Q16206 610 aaKnown RBP7.32□□□□□ -1.24
NUP88-202ENST00000570937 FOXD4L6Q3SYB3 417 aaPredicted RBP7.32□□□□□ -1.24
NUP88-202ENST00000570937 FOXD4L3Q6VB84 417 aaPredicted RBP7.32□□□□□ -1.24
NUP88-202ENST00000570937 GRIA4P48058 902 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms