RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 GYS2P54840 703 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 CABP4P57796 275 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 DPCR1Q3MIW9 517 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 HSP90B2PQ58FF3 399 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
USP43-203ENST00000570827 FUCA2Q9BTY2 467 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 EVCP57679 992 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 TERF2Q15554 542 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
USP43-203ENST00000570827 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
USP43-203ENST00000570827 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 MAP3K5Q99683 1374 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.56
USP43-203ENST00000570827 SCRN1Q12765 414 aa11.52□□□□□ -0.56
USP43-203ENST00000570827 SLC4A8Q2Y0W8 1093 aa11.52□□□□□ -0.56
USP43-203ENST00000570827 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.56
USP43-203ENST00000570827 CERS3Q8IU89 383 aa11.52□□□□□ -0.56
USP43-203ENST00000570827 LZTFL1Q9NQ48 299 aa11.52□□□□□ -0.56
USP43-203ENST00000570827 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
USP43-203ENST00000570827 MICU3Q86XE3 530 aa11.52□□□□□ -0.57
USP43-203ENST00000570827 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
USP43-203ENST00000570827 SPTLC2O15270 562 aa11.52□□□□□ -0.57
USP43-203ENST00000570827 LEKR1Q6ZMV7 388 aa11.52□□□□□ -0.57
USP43-203ENST00000570827 KRBA2Q6ZNG9 492 aa11.52□□□□□ -0.57
USP43-203ENST00000570827 PRDM11Q9NQV5 511 aa11.52□□□□□ -0.57
USP43-203ENST00000570827 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 CAVIN2O95810 425 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 SYKP43405 635 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
USP43-203ENST00000570827 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 SASH1O94885 1247 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 PDIA4P13667 645 aaKnown RBP11.51□□□□□ -0.57
USP43-203ENST00000570827 NDUFA8P51970 172 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 LMBR1LQ6UX01 489 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 CCDC150Q8NCX0 1101 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 AK7Q96M32 723 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
USP43-203ENST00000570827 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 CPS1P31327 1500 aa11.51□□□□□ -0.57
USP43-203ENST00000570827 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
USP43-203ENST00000570827 CYP21A2P08686 494 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 KIF4BQ2VIQ3 1234 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 DHX32Q7L7V1 743 aaKnown RBP11.5□□□□□ -0.57
USP43-203ENST00000570827 GOLPH3LQ9H4A5 285 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 TCHHQ07283 1943 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 FANCCQ00597 558 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 CCDC191Q8NCU4 936 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 DESI2Q9BSY9 194 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 TAF5LO75529 589 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
USP43-203ENST00000570827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP43-203ENST00000570827 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
USP43-203ENST00000570827 CCP110O43303 1012 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CTIFO43310 598 aaKnown RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 CLCN6P51797 869 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 POLA2Q14181 598 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 ARFGAP3Q9NP61 516 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 ZSCAN12O43309 604 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 IDH1O75874 414 aaKnown RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 STX17P56962 302 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 PPP1R13BQ96KQ4 1090 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 ZNF202O95125 648 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 RESTQ13127 1097 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CWC15Q9P013 229 aaKnown RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 ELP1O95163 1332 aa11.49□□□□□ -0.57
USP43-203ENST00000570827 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
USP43-203ENST00000570827 A1BGP04217 495 aa11.48□□□□□ -0.57
USP43-203ENST00000570827 TPM1P09493 284 aa11.48□□□□□ -0.57
USP43-203ENST00000570827 ADKP55263 362 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP43-203ENST00000570827 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 TRMT44Q8IYL2 757 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 MAP2P11137 1827 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 OAS2P29728 719 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 HNRNPH2P55795 449 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
USP43-203ENST00000570827 VPS18Q9P253 973 aa11.48□□□□□ -0.57
USP43-203ENST00000570827 ALDH1L1O75891 902 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms