RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 ZNF280AP59817 542 aaPredicted RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 CCDC57Q2TAC2 916 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 KIF4BQ2VIQ3 1234 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 RABL6Q3YEC7 729 aaPredicted RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 TAF7LQ5H9L4 462 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 DACT2Q5SW24 774 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 PODNQ7Z5L7 613 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 USP48Q86UV5 1035 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 AGBL3Q8NEM8 1001 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 ZC3H15Q8WU90 426 aaKnown RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 PUS3Q9BZE2 481 aaKnown RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 COA1Q9GZY4 146 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 USP44Q9H0E7 712 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 BICC1Q9H694 974 aaKnown RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 ZNF609O15014 1411 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 ZNF646O15015 1829 aaPredicted RBP6.83□□□□□ -1.32
CHD3-212ENST00000570758 PSME4Q14997 1843 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 A0A1B0GUL6 1792 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 ADM5C9JUS6 153 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 PLIN1O60240 522 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 CELF2O95319 508 aaKnown RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 CT47B1P0C2W7 299 aaPredicted RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 HSPA1AP0DMV8 641 aaKnown RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 HSPA1BP0DMV9 641 aaKnown RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 KCNJ4P48050 445 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 BRPF1P55201 1214 aaPredicted RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 DEFB115Q30KQ5 88 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 LDHAL6AQ6ZMR3 332 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 C15orf52Q6ZUT6 534 aaKnown RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 FBXW7Q969H0 707 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 CD209Q9NNX6 404 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 CNNM1Q9NRU3 951 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 ABT1Q9ULW3 272 aaKnown RBP6.82□□□□□ -1.32
CHD3-212ENST00000570758 CEP350Q5VT06 3117 aa6.82□□□□□ -1.32
CHD3-212ENST00000570758 RASSF10A6NK89 507 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 USP17L8P0C7I0 530 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 GTF2IP78347 998 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 HNRNPUQ00839 825 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD3-212ENST00000570758 SCARF1Q14162 830 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 LRRC24Q50LG9 513 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 STRIP1Q5VSL9 837 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 CDC37L1Q7L3B6 337 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 KRT26Q7Z3Y9 468 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 KLHDC4Q8TBB5 520 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 API5Q9BZZ5 524 aaKnown RBP6.81□□□□□ -1.32
CHD3-212ENST00000570758 ZNF408Q9H9D4 720 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 GGA3Q9NZ52 723 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 TNNQ9UQP3 1299 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 RIPOR2Q9Y4F9 1068 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 TLL2Q9Y6L7 1015 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 TRPM7Q96QT4 1865 aa6.81□□□□□ -1.32
CHD3-212ENST00000570758 WDR33Q9C0J8 1336 aaKnown RBP6.8□□□□□ -1.32
CHD3-212ENST00000570758 BCAR3O75815 825 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 RFX5P48382 616 aaPredicted RBP6.8□□□□□ -1.32
CHD3-212ENST00000570758 TTLL5Q6EMB2 1281 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 CYP4F22Q6NT55 531 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 CERS5Q8N5B7 392 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 DCPSQ96C86 337 aaKnown RBP6.8□□□□□ -1.32
CHD3-212ENST00000570758 CAPNS2Q96L46 248 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 SCAF8Q9UPN6 1271 aaKnown RBP6.8□□□□□ -1.32
CHD3-212ENST00000570758 JAG2Q9Y219 1238 aa6.8□□□□□ -1.32
CHD3-212ENST00000570758 POLR2AP24928 1970 aaKnown RBP6.79□□□□□ -1.32
CHD3-212ENST00000570758 FOXN1O15353 648 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 UBTFL1P0CB47 393 aaPredicted RBP6.79□□□□□ -1.32
CHD3-212ENST00000570758 IL1R1P14778 569 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 GYG1P46976 350 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 UBE4AQ14139 1066 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 METTL24Q5JXM2 366 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
CHD3-212ENST00000570758 ANGEL2Q5VTE6 544 aaKnown RBP6.79□□□□□ -1.32
CHD3-212ENST00000570758 ZNF804AQ7Z570 1209 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 KIAA0825Q8IV33 1275 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 VGLL2Q8N8G2 317 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 CDCA5Q96FF9 252 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 MEIS3Q99687 375 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 PCDHAC2Q9Y5I4 1007 aa6.79□□□□□ -1.32
CHD3-212ENST00000570758 LRRFIP2Q9Y608 721 aaKnown RBP6.79□□□□□ -1.32
CHD3-212ENST00000570758 FAM205AQ6ZU69 1335 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 MROH5Q6ZUA9 1318 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 MYO3BQ8WXR4 1341 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 KIF16BQ96L93 1317 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 EYA2O00167 538 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 WNT10BO00744 389 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 AOC2O75106 756 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 SASH1O94885 1247 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 HIBADHP31937 336 aaKnown RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 PTPN12Q05209 780 aaKnown RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 GRM1Q13255 1194 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 INTS3Q68E01 1043 aaKnown RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 PAXIP1Q6ZW49 1069 aaPredicted RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 ATG9AQ7Z3C6 839 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 FBXO33Q7Z6M2 555 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 TDRD7Q8NHU6 1098 aaKnown RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 ZBED3Q96IU2 234 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms