RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
MMP2-208ENST00000570308 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
MMP2-208ENST00000570308 CLSTN2Q9H4D0 955 aa12.12□□□□□ -0.47
MMP2-208ENST00000570308 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
MMP2-208ENST00000570308 H3BQF6 201 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 JAKMIP3Q5VZ66 844 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 ERC1Q8IUD2 1116 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
MMP2-208ENST00000570308 TACO1Q9BSH4 297 aaKnown RBP12.11□□□□□ -0.47
MMP2-208ENST00000570308 KIF3CO14782 793 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 SRGAP3O43295 1099 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 EIF3JO75822 258 aaKnown RBP12.11□□□□□ -0.47
MMP2-208ENST00000570308 ERLIN2O94905 339 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 GCP02774 474 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 MCM10Q7L590 875 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 TTC6Q86TZ1 520 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 MTMR6Q9Y217 621 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 RBM43Q6ZSC3 357 aaKnown RBP12.11□□□□□ -0.47
MMP2-208ENST00000570308 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
MMP2-208ENST00000570308 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 IRF6O14896 467 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 GJB2P29033 226 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
MMP2-208ENST00000570308 LONRF2Q1L5Z9 754 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
MMP2-208ENST00000570308 PDE1AP54750 535 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 GBP6Q6ZN66 633 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 BIRC2Q13490 618 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
MMP2-208ENST00000570308 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 PPFIA4O75335 1185 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 SFPQP23246 707 aaKnown RBP eCLIP12.09□□□□□ -0.47
MMP2-208ENST00000570308 KCNJ6P48051 423 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 IQCB1Q15051 598 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
MMP2-208ENST00000570308 HSP90B2PQ58FF3 399 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 AKAP4Q5JQC9 854 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 IL17REQ8NFR9 667 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 PARD6BQ9BYG5 372 aa12.09□□□□□ -0.47
MMP2-208ENST00000570308 SCAND2PQ9GZW5 306 aaPredicted RBP12.09□□□□□ -0.47
MMP2-208ENST00000570308 H0YHG0 523 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
MMP2-208ENST00000570308 LRRC31Q6UY01 552 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 BICD2Q8TD16 824 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 CCDC151A5D8V7 595 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 FOXO3O43524 673 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
MMP2-208ENST00000570308 SSR1P43307 286 aaKnown RBP12.08□□□□□ -0.48
MMP2-208ENST00000570308 MCM6Q14566 821 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 TBC1D22AQ8WUA7 517 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 OSBPL5Q9H0X9 879 aaPredicted RBP12.08□□□□□ -0.48
MMP2-208ENST00000570308 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
MMP2-208ENST00000570308 AK2P54819 239 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 BRD3Q15059 726 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 HDXQ7Z353 690 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 RABGGTAQ92696 567 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 SPATA32Q96LK8 384 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
MMP2-208ENST00000570308 CHMLP26374 656 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 STX1AQ16623 288 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 MAP9Q49MG5 647 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
MMP2-208ENST00000570308 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 MAP2K7O14733 419 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 SCP2P22307 547 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 CEP85Q6P2H3 762 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 FAN1Q9Y2M0 1017 aa12.07□□□□□ -0.48
MMP2-208ENST00000570308 GNAI3P08754 354 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 ATF3P18847 181 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 HSPA4P34932 840 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
MMP2-208ENST00000570308 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
MMP2-208ENST00000570308 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
MMP2-208ENST00000570308 TUBGCP6Q96RT7 1819 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
MMP2-208ENST00000570308 HMMRO75330 724 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
MMP2-208ENST00000570308 STAG1Q8WVM7 1258 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
MMP2-208ENST00000570308 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
MMP2-208ENST00000570308 SGSM2O43147 1006 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms