RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 HELLSQ9NRZ9 838 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 RBM8AQ9Y5S9 174 aaKnown RBP27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 RNF113AO15541 343 aaKnown RBP27.12■■□□□ 1.93
VCPKMT-205ENST00000569518 NEK4P51957 841 aa27.12■■□□□ 1.93
VCPKMT-205ENST00000569518 PRR5LQ6MZQ0 368 aa27.12■■□□□ 1.93
VCPKMT-205ENST00000569518 IL27Q8NEV9 243 aa27.12■■□□□ 1.93
VCPKMT-205ENST00000569518 SEC62Q99442 399 aaKnown RBP27.12■■□□□ 1.93
VCPKMT-205ENST00000569518 SPRYD3Q8NCJ5 442 aa27.11■■□□□ 1.93
VCPKMT-205ENST00000569518 MINPP1Q9UNW1 487 aa27.11■■□□□ 1.93
VCPKMT-205ENST00000569518 RPS8P62241 208 aaKnown RBP27.11■■□□□ 1.93
VCPKMT-205ENST00000569518 DDIT3P35638 169 aa27.1■■□□□ 1.93
VCPKMT-205ENST00000569518 SLFNL1Q499Z3 407 aa27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 PRPF40BQ6NWY9 871 aaKnown RBP27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 NPHP1O15259 732 aa27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 ZFYP08048 801 aaPredicted RBP27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 LRRFIP1Q32MZ4 808 aaKnown RBP27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 CCDC129Q6ZRS4 1044 aa27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 TFCP2L1Q9NZI6 479 aa27.09■■□□□ 1.93
VCPKMT-205ENST00000569518 DOCK2Q92608 1830 aa27.08■■□□□ 1.93
VCPKMT-205ENST00000569518 CYP2E1P05181 493 aaPredicted RBP27.08■■□□□ 1.93
VCPKMT-205ENST00000569518 DDR1Q08345 913 aa27.08■■□□□ 1.93
VCPKMT-205ENST00000569518 CREB3L3Q68CJ9 461 aa27.08■■□□□ 1.93
VCPKMT-205ENST00000569518 MYO5AQ9Y4I1 1855 aaKnown RBP27.08■■□□□ 1.93
VCPKMT-205ENST00000569518 MAST3O60307 1309 aa27.07■■□□□ 1.92
VCPKMT-205ENST00000569518 SERPINB2P05120 415 aa27.07■■□□□ 1.92
VCPKMT-205ENST00000569518 UBE4AQ14139 1066 aa27.07■■□□□ 1.92
VCPKMT-205ENST00000569518 UPF3BQ9BZI7 483 aaKnown RBP27.07■■□□□ 1.92
VCPKMT-205ENST00000569518 HMG20BQ9P0W2 317 aa27.07■■□□□ 1.92
VCPKMT-205ENST00000569518 TTF1Q15361 905 aaPredicted RBP27.06■■□□□ 1.92
VCPKMT-205ENST00000569518 ZNF804BA4D1E1 1349 aa27.06■■□□□ 1.92
VCPKMT-205ENST00000569518 POLRMTO00411 1230 aaKnown RBP27.06■■□□□ 1.92
VCPKMT-205ENST00000569518 SLC27A2O14975 620 aa27.06■■□□□ 1.92
VCPKMT-205ENST00000569518 RASGRF1Q13972 1273 aa27.06■■□□□ 1.92
VCPKMT-205ENST00000569518 KCNJ4P48050 445 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 MCM2P49736 904 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 CRY2Q49AN0 593 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 COL23A1Q86Y22 540 aaPredicted RBP27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 SPATA5Q8NB90 893 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 TM6SF1Q9BZW5 370 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 PIH1D3Q9NQM4 214 aaKnown RBP27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 NRXN2Q9P2S2 1712 aa27.05■■□□□ 1.92
VCPKMT-205ENST00000569518 BCAMP50895 628 aa27.04■■□□□ 1.92
VCPKMT-205ENST00000569518 OSBP2Q969R2 916 aa27.04■■□□□ 1.92
VCPKMT-205ENST00000569518 RPAP1Q9BWH6 1393 aaPredicted RBP27.04■■□□□ 1.92
VCPKMT-205ENST00000569518 TTC14Q96N46 770 aa27.04■■□□□ 1.92
VCPKMT-205ENST00000569518 M0R2C6 588 aa27.03■■□□□ 1.92
VCPKMT-205ENST00000569518 ZKSCAN1P17029 563 aaPredicted RBP27.03■■□□□ 1.92
VCPKMT-205ENST00000569518 ST5P78524 1137 aa27.03■■□□□ 1.92
VCPKMT-205ENST00000569518 TSGA10IPQ3SY00 556 aa27.03■■□□□ 1.92
VCPKMT-205ENST00000569518 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.03■■□□□ 1.92
VCPKMT-205ENST00000569518 WTIPA6NIX2 430 aaPredicted RBP27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 ADCK5Q3MIX3 580 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 RNF20Q5VTR2 975 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 FLAD1Q8NFF5 587 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 APPBP2Q92624 585 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 DSCC1Q9BVC3 393 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 U3KPZ7 1027 aaPredicted RBP27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 GRAPQ13588 217 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 GRAPLQ8TC17 118 aaPredicted RBP27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 ANKRD2Q9GZV1 360 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 CHMP5Q9NZZ3 219 aa27.02■■□□□ 1.92
VCPKMT-205ENST00000569518 ADD2P35612 726 aa27.01■■□□□ 1.91
VCPKMT-205ENST00000569518 ZSWIM6Q9HCJ5 1215 aa27.01■■□□□ 1.91
VCPKMT-205ENST00000569518 HSP90AA1P07900 732 aaKnown RBP27■■□□□ 1.91
VCPKMT-205ENST00000569518 ZSCAN25Q6NSZ9 544 aa27■■□□□ 1.91
VCPKMT-205ENST00000569518 JAKMIP1Q96N16 626 aaKnown RBP27■■□□□ 1.91
VCPKMT-205ENST00000569518 PNPLA7Q6ZV29 1317 aa27■■□□□ 1.91
VCPKMT-205ENST00000569518 CASTP20810 708 aaKnown RBP27■■□□□ 1.91
VCPKMT-205ENST00000569518 VPS53Q5VIR6 699 aa27■■□□□ 1.91
VCPKMT-205ENST00000569518 NLGN1Q8N2Q7 840 aa27■■□□□ 1.91
VCPKMT-205ENST00000569518 TAF6LQ9Y6J9 622 aa27■■□□□ 1.91
VCPKMT-205ENST00000569518 ANKRD31Q8N7Z5 1873 aa26.99■■□□□ 1.91
VCPKMT-205ENST00000569518 UBE3CQ15386 1083 aa26.99■■□□□ 1.91
VCPKMT-205ENST00000569518 TMX3Q96JJ7 454 aa26.99■■□□□ 1.91
VCPKMT-205ENST00000569518 CIZ1Q9ULV3 898 aaPredicted RBP26.99■■□□□ 1.91
VCPKMT-205ENST00000569518 KLRG2A4D1S0 409 aaPredicted RBP26.98■■□□□ 1.91
VCPKMT-205ENST00000569518 HSPD1P10809 573 aaKnown RBP26.98■■□□□ 1.91
VCPKMT-205ENST00000569518 WASHC4Q2M389 1173 aa26.98■■□□□ 1.91
VCPKMT-205ENST00000569518 COL1A1P02452 1464 aaPredicted RBP26.98■■□□□ 1.91
VCPKMT-205ENST00000569518 GYG1P46976 350 aa26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 SLC9C2Q5TAH2 1124 aa26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 CAMKK2Q96RR4 588 aa26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 PUS7LQ9H0K6 701 aaKnown RBP26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 TCRBV5S4A2TA0A5A2 114 aa26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 IDH1O75874 414 aaKnown RBP26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 PDE6AP16499 860 aa26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 RPGRQ92834 1020 aaKnown RBP26.97■■□□□ 1.91
VCPKMT-205ENST00000569518 FOXP2O15409 715 aa26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 FBXO33Q7Z6M2 555 aa26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 FAM84BQ96KN1 310 aaPredicted RBP26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 FOXD4L1Q9NU39 408 aa26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 WWC3Q9ULE0 1092 aa26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 IRS2Q9Y4H2 1338 aa26.96■■□□□ 1.91
VCPKMT-205ENST00000569518 CPA1P15085 419 aa26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 HOXA10P31260 410 aaPredicted RBP26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 CUL4AQ13619 759 aa26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 RUFY3Q7L099 469 aa26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 GNL3LQ9NVN8 582 aaKnown RBP26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 CYP46A1Q9Y6A2 500 aa26.95■■□□□ 1.91
VCPKMT-205ENST00000569518 QSER1Q2KHR3 1735 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms