RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 AGBL3Q8NEM8 1001 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 ANKRD2Q9GZV1 360 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 USP17L3A6NCW0 530 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 USP17L4A6NCW7 530 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
CDH3-209ENST00000569080 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
CDH3-209ENST00000569080 DLK2Q6UY11 383 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 USP17L1Q7RTZ2 530 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 ZNF594Q96JF6 807 aaPredicted RBP9.9□□□□□ -0.82
CDH3-209ENST00000569080 MXD3Q9BW11 206 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 COA1Q9GZY4 146 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 BICC1Q9H694 974 aaKnown RBP9.9□□□□□ -0.82
CDH3-209ENST00000569080 C9orf78Q9NZ63 289 aaPredicted RBP9.9□□□□□ -0.82
CDH3-209ENST00000569080 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
CDH3-209ENST00000569080 ADM5C9JUS6 153 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 TAF5LO75529 589 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 CDC37L1Q7L3B6 337 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 SAPCD2Q86UD0 394 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 USP44Q9H0E7 712 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 SMC4Q9NTJ3 1288 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 GGA3Q9NZ52 723 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 ABT1Q9ULW3 272 aaKnown RBP9.89□□□□□ -0.83
CDH3-209ENST00000569080 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 ECM29Q5VYK3 1845 aa9.89□□□□□ -0.83
CDH3-209ENST00000569080 MYO3BQ8WXR4 1341 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 G3V3G9 751 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 CELF2O95319 508 aaKnown RBP9.88□□□□□ -0.83
CDH3-209ENST00000569080 USP17L8P0C7I0 530 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 CCDC57Q2TAC2 916 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 DEFB115Q30KQ5 88 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 MIER1Q8N108 512 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
CDH3-209ENST00000569080 PUS3Q9BZE2 481 aaKnown RBP9.88□□□□□ -0.83
CDH3-209ENST00000569080 CD209Q9NNX6 404 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 PAPPA2Q9BXP8 1791 aa9.88□□□□□ -0.83
CDH3-209ENST00000569080 PITPNM2Q9BZ72 1349 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 WDR33Q9C0J8 1336 aaKnown RBP9.87□□□□□ -0.83
CDH3-209ENST00000569080 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
CDH3-209ENST00000569080 RBM26Q5T8P6 1007 aaKnown RBP9.87□□□□□ -0.83
CDH3-209ENST00000569080 COL13A1Q5TAT6 717 aaPredicted RBP9.87□□□□□ -0.83
CDH3-209ENST00000569080 LDHAL6AQ6ZMR3 332 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 KRT26Q7Z3Y9 468 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 CERS5Q8N5B7 392 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 VGLL2Q8N8G2 317 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 ZBED3Q96IU2 234 aaPredicted RBP9.87□□□□□ -0.83
CDH3-209ENST00000569080 HHIPL1Q96JK4 782 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 CAPNS2Q96L46 248 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 RIPOR2Q9Y4F9 1068 aa9.87□□□□□ -0.83
CDH3-209ENST00000569080 FOXN1O15353 648 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 IL1R1P14778 569 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 KCNJ4P48050 445 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 RFX5P48382 616 aaPredicted RBP9.86□□□□□ -0.83
CDH3-209ENST00000569080 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 ANGEL2Q5VTE6 544 aaKnown RBP9.86□□□□□ -0.83
CDH3-209ENST00000569080 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
CDH3-209ENST00000569080 CYP4F22Q6NT55 531 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 CNNM1Q9NRU3 951 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 WBP1LQ9NX94 342 aa9.86□□□□□ -0.83
CDH3-209ENST00000569080 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
CDH3-209ENST00000569080 WNT10BO00744 389 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 GTF2IP78347 998 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 UBE4AQ14139 1066 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 SCARF1Q14162 830 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 NBPF9Q3BBW0 867 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 LRRC24Q50LG9 513 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 TTLL5Q6EMB2 1281 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 KLHDC4Q8TBB5 520 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 DCPSQ96C86 337 aaKnown RBP9.85□□□□□ -0.83
CDH3-209ENST00000569080 ZNF408Q9H9D4 720 aa9.85□□□□□ -0.83
CDH3-209ENST00000569080 MROH5Q6ZUA9 1318 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 KIF16BQ96L93 1317 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 SASH1O94885 1247 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 ECE1P42892 770 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 FKBP1AP62942 108 aaKnown RBP9.84□□□□□ -0.83
CDH3-209ENST00000569080 ZNF804AQ7Z570 1209 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 KIAA0825Q8IV33 1275 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 CDCA5Q96FF9 252 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 API5Q9BZZ5 524 aaKnown RBP9.84□□□□□ -0.83
CDH3-209ENST00000569080 GBA2Q9HCG7 927 aaPredicted RBP9.84□□□□□ -0.83
CDH3-209ENST00000569080 SCAF8Q9UPN6 1271 aaKnown RBP9.84□□□□□ -0.83
CDH3-209ENST00000569080 COL1A1P02452 1464 aaPredicted RBP9.84□□□□□ -0.83
CDH3-209ENST00000569080 SSC5DA1L4H1 1573 aa9.84□□□□□ -0.83
CDH3-209ENST00000569080 AOX1Q06278 1338 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 FAM205AQ6ZU69 1335 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 FAM155AB1AL88 458 aaPredicted RBP9.83□□□□□ -0.84
CDH3-209ENST00000569080 PLIN1O60240 522 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 AOC2O75106 756 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 TRIM27P14373 513 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 GYG1P46976 350 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 MMP14P50281 582 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 PTPN12Q05209 780 aaKnown RBP9.83□□□□□ -0.84
CDH3-209ENST00000569080 TDRD7Q8NHU6 1098 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms