RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.4
CASC17-201ENST00000569074 LDLRAD1Q5T700 205 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 CLEC17AQ6ZS10 378 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 Q6ZVU0 165 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 TMEM87AQ8NBN3 555 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 SNX21Q969T3 373 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 ZFAND3Q9H8U3 227 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 GMPR2Q9P2T1 348 aaKnown RBP6.34□□□□□ -1.4
CASC17-201ENST00000569074 VTI1BQ9UEU0 232 aa6.34□□□□□ -1.4
CASC17-201ENST00000569074 TARBP1Q13395 1621 aaKnown RBP6.33□□□□□ -1.4
CASC17-201ENST00000569074 ARHGAP31Q2M1Z3 1444 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 KIAA1107Q9UPP5 1409 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 ARHGEF11O15085 1522 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 FAM181BA6NEQ2 426 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 TULP2O00295 520 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 CLGNO14967 610 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 PDGFAP04085 211 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 NAALADL2Q58DX5 795 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 TMC4Q7Z404 712 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 SREK1Q8WXA9 508 aaKnown RBP6.33□□□□□ -1.4
CASC17-201ENST00000569074 YY1AP1Q9H869 796 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 MBD5Q9P267 1494 aa6.33□□□□□ -1.4
CASC17-201ENST00000569074 WDR4P57081 412 aaKnown RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 DAB2P98082 770 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 TREML1Q86YW5 311 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 GPR152Q8TDT2 470 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 RBSNQ9H1K0 784 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 RRP7BPQ9NSQ0 103 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 CALCOCO1Q9P1Z2 691 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 EIF4G3O43432 1585 aaKnown RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 POLA1P09884 1462 aaPredicted RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 ZSCAN23Q3MJ62 389 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 AXDND1Q5T1B0 1012 aaPredicted RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 ANKRD7Q92527 254 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 JARID2Q92833 1246 aaPredicted RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 PPP1R1BQ9UD71 204 aaPredicted RBP6.32□□□□□ -1.4
CASC17-201ENST00000569074 HDAC5Q9UQL6 1122 aa6.32□□□□□ -1.4
CASC17-201ENST00000569074 KDM6BO15054 1643 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 PCSK2P16519 638 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 U2AF2P26368 475 aaKnown RBP eCLIP6.31□□□□□ -1.4
CASC17-201ENST00000569074 TXLNAP40222 546 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 ORC1Q13415 861 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 ALG1LQ6GMV1 187 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 CERS3Q8IU89 383 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 NUDT16Q96DE0 195 aaKnown RBP6.31□□□□□ -1.4
CASC17-201ENST00000569074 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
CASC17-201ENST00000569074 MTUS2Q5JR59 1369 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 ANKRD30AQ9BXX3 1397 aa6.31□□□□□ -1.4
CASC17-201ENST00000569074 MAGI1Q96QZ7 1491 aaPredicted RBP6.3□□□□□ -1.4
CASC17-201ENST00000569074 PTMAP06454 111 aaKnown RBP6.3□□□□□ -1.4
CASC17-201ENST00000569074 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 FAM193AP78312 1265 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 NT5DC4Q86YG4 428 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 PIBF1Q8WXW3 757 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 EFCC1Q9HA90 598 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 ZNF521Q96K83 1311 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 A6NHS1 94 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 CAPN2P17655 700 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASC17-201ENST00000569074 SLC27A3Q5K4L6 730 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 CYB5RLQ6IPT4 315 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 CAVIN1Q6NZI2 390 aaKnown RBP6.3□□□□□ -1.4
CASC17-201ENST00000569074 SNIP1Q8TAD8 396 aaKnown RBP6.3□□□□□ -1.4
CASC17-201ENST00000569074 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 DACH1Q9UI36 760 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASC17-201ENST00000569074 PLEKHH1Q9ULM0 1364 aa6.3□□□□□ -1.4
CASC17-201ENST00000569074 SUPT6HQ7KZ85 1726 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 NKTRP30414 1462 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 FGD5Q6ZNL6 1462 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 CLASP1Q7Z460 1538 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 J3QL48 77 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 BAG4O95429 457 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 APPP05067 770 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 TIMP2P16035 220 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 GNA15P30679 374 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 SLFN5Q08AF3 891 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 CHAF1AQ13111 956 aaPredicted RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 GNASQ5JWF2 1037 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 DIAPH3Q9NSV4 1193 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 EPRSP07814 1512 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 EIF1AYO14602 144 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 TERTO14746 1132 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 FANCCQ00597 558 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 TERF2Q15554 542 aa6.29□□□□□ -1.4
CASC17-201ENST00000569074 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
CASC17-201ENST00000569074 RHPN1Q8TCX5 695 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms