RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
CNOT1-215ENST00000569020 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
CNOT1-215ENST00000569020 SCARF1Q14162 830 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 GCKRQ14397 625 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
CNOT1-215ENST00000569020 DNAAF4Q8WXU2 420 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 FANCIQ9NVI1 1328 aa17.45■□□□□ 0.38
CNOT1-215ENST00000569020 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
CNOT1-215ENST00000569020 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
CNOT1-215ENST00000569020 CDCA5Q96FF9 252 aa17.44■□□□□ 0.38
CNOT1-215ENST00000569020 GMLQ99445 158 aa17.44■□□□□ 0.38
CNOT1-215ENST00000569020 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
CNOT1-215ENST00000569020 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
CNOT1-215ENST00000569020 ASTN2O75129 1339 aaPredicted RBP17.44■□□□□ 0.38
CNOT1-215ENST00000569020 WTIPA6NIX2 430 aaPredicted RBP17.43■□□□□ 0.38
CNOT1-215ENST00000569020 ITGA6P23229 1130 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 LINS1Q8NG48 757 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 MPHOSPH8Q99549 860 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
CNOT1-215ENST00000569020 FAM155AB1AL88 458 aaPredicted RBP17.42■□□□□ 0.38
CNOT1-215ENST00000569020 VAMP4O75379 141 aa17.42■□□□□ 0.38
CNOT1-215ENST00000569020 OGFOD1Q8N543 542 aa17.42■□□□□ 0.38
CNOT1-215ENST00000569020 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
CNOT1-215ENST00000569020 ANKRD2Q9GZV1 360 aa17.42■□□□□ 0.38
CNOT1-215ENST00000569020 PAPPA2Q9BXP8 1791 aa17.41■□□□□ 0.38
CNOT1-215ENST00000569020 CSF1RP07333 972 aa17.41■□□□□ 0.38
CNOT1-215ENST00000569020 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
CNOT1-215ENST00000569020 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
CNOT1-215ENST00000569020 ZNF804BA4D1E1 1349 aa17.41■□□□□ 0.38
CNOT1-215ENST00000569020 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
CNOT1-215ENST00000569020 CASP7P55210 303 aa17.4■□□□□ 0.38
CNOT1-215ENST00000569020 FKBP1BP68106 108 aa17.4■□□□□ 0.38
CNOT1-215ENST00000569020 KIF23Q02241 960 aaPredicted RBP17.4■□□□□ 0.38
CNOT1-215ENST00000569020 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
CNOT1-215ENST00000569020 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
CNOT1-215ENST00000569020 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CNOT1-215ENST00000569020 CCDC85CA6NKD9 419 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 SLC10A3P09131 477 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 KCNJ4P48050 445 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 MMP14P50281 582 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 TXNRD3Q86VQ6 643 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 SAGE1Q9NXZ1 904 aa17.39■□□□□ 0.37
CNOT1-215ENST00000569020 CHRNDQ07001 517 aa17.38■□□□□ 0.37
CNOT1-215ENST00000569020 NBPF9Q3BBW0 867 aa17.38■□□□□ 0.37
CNOT1-215ENST00000569020 TTLL5Q6EMB2 1281 aa17.38■□□□□ 0.37
CNOT1-215ENST00000569020 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
CNOT1-215ENST00000569020 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
CNOT1-215ENST00000569020 MCOLN1Q9GZU1 580 aa17.37■□□□□ 0.37
CNOT1-215ENST00000569020 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
CNOT1-215ENST00000569020 ECM29Q5VYK3 1845 aa17.36■□□□□ 0.37
CNOT1-215ENST00000569020 WNT10BO00744 389 aa17.36■□□□□ 0.37
CNOT1-215ENST00000569020 NF2P35240 595 aa17.36■□□□□ 0.37
CNOT1-215ENST00000569020 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
CNOT1-215ENST00000569020 DGKZQ13574 1117 aa17.36■□□□□ 0.37
CNOT1-215ENST00000569020 SCAF8Q9UPN6 1271 aaKnown RBP17.36■□□□□ 0.37
CNOT1-215ENST00000569020 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
CNOT1-215ENST00000569020 F6X3S4 739 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 TRPA1O75762 1119 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 KLRK1P26718 216 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 GTF2IP78347 998 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 RASAL3Q86YV0 1011 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 CSRNP1Q96S65 589 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 RNF186Q9NXI6 227 aa17.35■□□□□ 0.37
CNOT1-215ENST00000569020 FOXO4P98177 505 aa17.34■□□□□ 0.37
CNOT1-215ENST00000569020 TTLL12Q14166 644 aaPredicted RBP17.34■□□□□ 0.37
CNOT1-215ENST00000569020 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
CNOT1-215ENST00000569020 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
CNOT1-215ENST00000569020 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
CNOT1-215ENST00000569020 TAF5LO75529 589 aa17.33■□□□□ 0.36
CNOT1-215ENST00000569020 SASH1O94885 1247 aa17.33■□□□□ 0.36
CNOT1-215ENST00000569020 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
CNOT1-215ENST00000569020 PRAMEF18Q5VWM3 479 aa17.33■□□□□ 0.36
CNOT1-215ENST00000569020 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
CNOT1-215ENST00000569020 GRM8O00222 908 aa17.32■□□□□ 0.36
CNOT1-215ENST00000569020 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
CNOT1-215ENST00000569020 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
CNOT1-215ENST00000569020 C15orf52Q6ZUT6 534 aaKnown RBP17.32■□□□□ 0.36
CNOT1-215ENST00000569020 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
CNOT1-215ENST00000569020 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
CNOT1-215ENST00000569020 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
CNOT1-215ENST00000569020 HELBQ8NG08 1087 aaPredicted RBP17.32■□□□□ 0.36
CNOT1-215ENST00000569020 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
CNOT1-215ENST00000569020 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
CNOT1-215ENST00000569020 IRS2Q9Y4H2 1338 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 SNAP23O00161 211 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 MLLT1Q03111 559 aaPredicted RBP17.3■□□□□ 0.36
CNOT1-215ENST00000569020 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 LDHAL6AQ6ZMR3 332 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 CNNM1Q9NRU3 951 aa17.3■□□□□ 0.36
CNOT1-215ENST00000569020 COL1A1P02452 1464 aaPredicted RBP17.3■□□□□ 0.36
CNOT1-215ENST00000569020 IL1R1P14778 569 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms