RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MAP4K1Q92918 833 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 MTMR7Q9Y216 660 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 EFCAB8A8MWE9 144 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
PALB2-206ENST00000568219 PNOCQ13519 176 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 NECTIN1Q15223 517 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 HDXQ7Z353 690 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 GBP3Q9H0R5 595 aa12.52□□□□□ -0.41
PALB2-206ENST00000568219 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 GRM8O00222 908 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
PALB2-206ENST00000568219 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 PPP2R2CQ9Y2T4 447 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
PALB2-206ENST00000568219 CCZ1BP86790 482 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
PALB2-206ENST00000568219 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 PSME1Q06323 249 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 KIAA1328Q86T90 577 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 FAN1Q9Y2M0 1017 aa12.51□□□□□ -0.41
PALB2-206ENST00000568219 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 TIMM10P62072 90 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
PALB2-206ENST00000568219 AOX1Q06278 1338 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 CHGBP05060 677 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 TFCP2Q12800 502 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 IQCB1Q15051 598 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 A0A087WZG4 1122 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 CTAGE9A4FU28 777 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 ATP2C2O75185 946 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
PALB2-206ENST00000568219 ARMCX5Q6P1M9 558 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
PALB2-206ENST00000568219 DACH1Q9UI36 760 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
PALB2-206ENST00000568219 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 ZEB2O60315 1214 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 DHX58Q96C10 678 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 DBNDD2Q9BQY9 259 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 NFE2L3Q9Y4A8 694 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 NPATQ14207 1427 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
PALB2-206ENST00000568219 ARHGAP6O43182 974 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 IDH1O75874 414 aaKnown RBP12.49□□□□□ -0.41
PALB2-206ENST00000568219 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 LIG3P49916 1009 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 MPHOSPH8Q99549 860 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
PALB2-206ENST00000568219 N4BP3O15049 544 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 CDC25BP30305 580 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 NLRP12P59046 1061 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 RESTQ13127 1097 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 JADE2Q9NQC1 790 aa12.49□□□□□ -0.41
PALB2-206ENST00000568219 ACTN2P35609 894 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 TOB2Q14106 344 aaPredicted RBP12.48□□□□□ -0.41
PALB2-206ENST00000568219 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 GOLGA5Q8TBA6 731 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 ABCC1P33527 1531 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 ZMYND10O75800 440 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 TUBB4AP04350 444 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 CCT6AP40227 531 aaKnown RBP12.48□□□□□ -0.41
PALB2-206ENST00000568219 CDR1P51861 262 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
PALB2-206ENST00000568219 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 ZNF446Q9NWS9 450 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 ZNF213O14771 459 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 COBLO75128 1261 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 CYP21A2P08686 494 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 PFKFB1P16118 471 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
PALB2-206ENST00000568219 JRKLQ9Y4A0 524 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 FHOD1Q9Y613 1164 aa12.48□□□□□ -0.41
PALB2-206ENST00000568219 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
PALB2-206ENST00000568219 EBAG9O00559 213 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 CCDC181Q5TID7 509 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms