RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CHSY3Q70JA7 882 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 CCNJLQ8IV13 435 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 TMEM102Q8N9M5 508 aaPredicted RBP8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 NXPE3Q969Y0 559 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 ABCB6Q9NP58 842 aa8.35□□□□□ -1.07
SHCBP1-206ENST00000567698 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
SHCBP1-206ENST00000567698 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
SHCBP1-206ENST00000567698 METTL12A8MUP2 240 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 GHRHP01286 108 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 BAG6P46379 1132 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 GRIA4P48058 902 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 DGKGP49619 791 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 TRIM33Q9UPN9 1127 aa8.33□□□□□ -1.08
SHCBP1-206ENST00000567698 PDE2AO00408 941 aaPredicted RBP8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 CTSHP09668 335 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 ALAS2P22557 587 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 KANK3Q6NY19 840 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 NUDT8Q8WV74 236 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 LIN7BQ9HAP6 207 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
SHCBP1-206ENST00000567698 M0R082 166 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 FGD1P98174 961 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 SPRED3Q2MJR0 410 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 ZNF417Q8TAU3 575 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 SPACA7Q96KW9 195 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 FRMD6Q96NE9 622 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 ZNF587Q96SQ5 575 aaPredicted RBP8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 EHD4Q9H223 541 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
SHCBP1-206ENST00000567698 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 NID1P14543 1247 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 VAMP1P23763 118 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 CEP135Q66GS9 1140 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 SVOPQ8N4V2 548 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 ADAM19Q9H013 955 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 SOX13Q9UN79 622 aa8.3□□□□□ -1.08
SHCBP1-206ENST00000567698 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 TM4SF5O14894 197 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 GIPC1O14908 333 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 RGS9O75916 674 aaPredicted RBP8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 RECKO95980 971 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 ITPKAP23677 461 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 SNRPNP63162 240 aaKnown RBP8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 LINC00114Q6XXX2 140 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 JPH1Q9HDC5 661 aaPredicted RBP8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
SHCBP1-206ENST00000567698 PSMD2Q13200 908 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 VN1R5Q7Z5H4 357 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 ZSCAN1Q8NBB4 408 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 MRRFQ96E11 262 aaKnown RBP8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 SRCIN1Q9C0H9 1055 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
SHCBP1-206ENST00000567698 A0A096LPE4 126 aa8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 A0A1W2PPZ6 126 aa8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 LACRTQ9GZZ8 138 aa8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 SH2B1Q9NRF2 756 aaPredicted RBP8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.09
SHCBP1-206ENST00000567698 SORBS3O60504 671 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 LILRB5O75023 590 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 USP17L7P0C7H9 530 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 EPHA1P21709 976 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 ANKRD24Q8TF21 1146 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 ZNF576Q9H609 170 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 FAM8A1Q9UBU6 413 aa8.26□□□□□ -1.09
SHCBP1-206ENST00000567698 FCGRTP55899 365 aa8.25□□□□□ -1.09
SHCBP1-206ENST00000567698 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
SHCBP1-206ENST00000567698 GDF6Q6KF10 455 aaPredicted RBP8.25□□□□□ -1.09
SHCBP1-206ENST00000567698 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
SHCBP1-206ENST00000567698 IGSF5Q9NSI5 407 aa8.25□□□□□ -1.09
SHCBP1-206ENST00000567698 PTPRAP18433 802 aa8.24□□□□□ -1.09
SHCBP1-206ENST00000567698 AMPD1P23109 780 aa8.24□□□□□ -1.09
SHCBP1-206ENST00000567698 MEI1Q5TIA1 1274 aa8.24□□□□□ -1.09
SHCBP1-206ENST00000567698 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
SHCBP1-206ENST00000567698 BACH2Q9BYV9 841 aa8.24□□□□□ -1.09
SHCBP1-206ENST00000567698 CDC27P30260 824 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 ZNF423Q2M1K9 1284 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 NEDD1Q8NHV4 660 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 ASAP3Q8TDY4 903 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 CRELD1Q96HD1 420 aa8.23□□□□□ -1.09
SHCBP1-206ENST00000567698 ADAMTS8Q9UP79 889 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 850.5 ms